KEGG   Prunus dulcis (almond): 117632110
Entry
117632110         CDS       T07328                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117632110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117632110
   03041 Spliceosome [BR:pdul03041]
    117632110
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117632110
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117632110
Spliceosome [BR:pdul03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    117632110
SSDB
Motif
Pfam: RRM_1 RRM_7 AF-4 FANCI_S1-cap Cut8
Other DBs
NCBI-GeneID: 117632110
NCBI-ProteinID: XP_034221406
LinkDB
Position
6:complement(17105406..17109288)
AA seq 469 aa
MAKITKTKKRRLIKTSDKTIEKKPKTQNPKQKFEEKEEREEEHPNPNQKQPQSDSDSGSV
SDSDSDSSESDVENLPELLQAYTKDQLIELIVEAASKDSALFNRIRDAADGDVSHRKIFI
HGLGWDTTRETLVAAFEPFGEIEECNLVLDKATGKAKGYGFVLFKTRRGAAKALKNPKKN
ISNRIASCQLASVGPANNNTTTSSSSFNAQSDSASRKIYVSSVPHDVDGEKLRIFFAKFG
EIETGPMGFDSQTGKCKGFALFLYKTVEGAKKALEEPFKVFEGHQLQCQKAAEGSKNKNS
AVAPPQGQMQQPTLAAVAAAQNMALFGQHPNLNPLYGGLMGNVGGGFVPGSANPGMVARA
LNPGIMGGALNPSVIPVSQVGQVGAGVGGYSGGSHGLVNLGGGSHGLVSLGGGSHGLSNP
SLLGAYGTSGSLPMLQGLQHVYPNTQVQQPGSGRPQRAGGSFAGYTSYM
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggcgaagatcacaaaaacgaagaagcgcaggctcatcaaaacatccgacaaaaccatt
gagaaaaaacccaaaacccaaaaccccaagcaaaaattcgaagaaaaagaagaaagagaa
gaagagcaccctaaccctaaccagaaacaaccccaatccgattccgattccggttccgtc
tcggactcagactcagactcgtccgagtccgacgtagagaacctccctgaactactccaa
gcctacaccaaggaccagctcatcgagctcatcgtcgaagcagcctccaaggactcggcc
ctcttcaaccgcattcgggatgctgcagacggcgacgtttcgcatcgaaagatcttcatc
cacggcctcggttgggacaccacgcgcgaaacccttgtcgctgccttcgaaccctttggc
gagatcgaggaatgcaatttggtgttggacaaggccacgggcaaggcaaaaggctatggc
ttcgtcctcttcaaaacgcgccgtggagccgccaaggcgttgaagaaccctaagaagaac
atcagcaatagaatcgcttcctgtcaattggcctcggtgggtccggccaacaacaacacg
acgacttcttcttcgtcgtttaacgctcaatcggactcggcatcgagaaaaatatacgtg
agcagcgtgccgcatgatgttgatggtgagaaattgagaattttttttgctaaatttggg
gaaatcgaaactgggccaatgggtttcgattcgcagaccggaaaatgcaagggtttcgct
ctgttcctgtacaagactgtggagggtgcgaagaaggctcttgaagaacccttcaaggtg
tttgaagggcaccaattgcaatgccagaaggcggccgaaggttccaagaacaagaactca
gctgtggcgcccccgcaagggcaaatgcagcagccgacactggctgctgtagcagcagcg
cagaatatggctttgttcggtcagcatccgaaccttaacccattgtacggtggattaatg
ggcaatgtgggtggtgggtttgttcctgggtctgccaacccgggtatggtggcccgagca
ttgaacccgggtataatgggaggggcattgaacccaagtgttattccggtaagccaagtg
ggccaggtgggtgctggtgttggtgggtacagtggagggtctcatgggttggtcaattta
ggtggagggtctcatgggttggtcagtttgggtggaggatctcatgggttgagtaacccc
tcattgcttggtgcatatgggacgagtgggtctcttcctatgctccagggtctgcagcac
gtttacccaaatacgcaggttcagcagccgggttctggtaggcctcagagggctggtggg
tcattcgctgggtatacatcatatatgtga

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