Prunus dulcis (almond): 117632209
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Entry
117632209 CDS
T07328
Name
(RefSeq) exosome complex component RRP41-like isoform X1
KO
K12587
exosome complex component MTR3
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117632209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117632209
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117632209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117632209
NCBI-ProteinID:
XP_034221527
LinkDB
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Position
6:complement(7420538..7425288)
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AA seq
261 aa
AA seq
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MAGKAGATPSTYSPSPTTHKTKSLSFGNDDVLRPDDREWHQCRPAFFQIGVVAATAGSAY
ADFGSTKVIVSVFGPRESKKAMMYSDIGRLSCHVSYTTFATPVRGQGSDHKEFSSMLHKA
LEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVTSVSVSYLG
KNLVLDPTLEEESHQDGSLILTCMPSRDEVTQLTITGEWSTPKINEGMKICMDACSKFSQ
IMKSCLKGLDSALEEEDSNVD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaaagctggagcaactccgagcacgtactcgccgtctccgacgacccacaag
actaaatcactaagctttggaaacgacgacgttctccgacccgatgaccgtgaatggcac
caatgcagacctgcctttttccagattggtgttgtagctgctactgctggatctgcttat
gcagattttggaagcaccaaggtcattgtttctgtgtttgggccaagagagagtaagaag
gcaatgatgtacagtgatataggacgtttaagttgccatgtcagctatacaacttttgct
accccagttcgtggacaggggtcggaccacaaagagttttcttcaatgcttcataaagct
ttggagggtgcaataatattggaaactttccccaagactactgtggatgtttttgcattg
gtgttggaatctgggggcagtgatcttcctgtagtgatatcatgtgctagccttgcccta
gcagatgcagggataatgatgtatgaccttgttacgtcagtttcagtgtcttatttggga
aagaaccttgtccttgatcctactttggaggaggaaagccaccaagatggaagcttaata
cttacttgtatgccttctcgcgacgaggtcactcaactaaccattaccggggaatggtct
accccaaaaattaatgagggaatgaagatttgtatggatgcctgctcaaagttttcacag
atcatgaagtcatgcttgaaaggacttgattctgctttggaagaagaggatagtaatgtt
gattag
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