Prunus dulcis (almond): 117632211
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Entry
117632211 CDS
T07328
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117632211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117632211
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117632211
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117632211
NCBI-ProteinID:
XP_034221529
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Position
6:complement(7425248..7429169)
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AA seq
257 aa
AA seq
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MAGKGGAALSTYSPSPTTQKTKSRIFGNDDVDWVRSDGREFHQCRPAFFKTGAVNAAAGS
AYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVGYTTFATPVRGQGSDHKEFSSMLH
KALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVTSVSVSG
LGKNLVIDPILEEESYQDGSLMLTCMPSRYEVTQLTITGEWSTPKINEGMQICLDACSKL
AVVMRACLKGPDSTLEE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaaaggtggagcagctctgagcacgtactctccgtctccgacgacccagaaa
accaaatcacgcatcttcggaaacgacgacgtcgattgggttcgatccgatggccgtgaa
ttccaccaatgcagacctgcctttttcaagactggtgctgtaaatgctgctgcaggatct
gcttatgcagaatttggaaataccaaagtcattgtttctgtatttgggccaagagagagt
aagaaggcaatgatgtacagtgatataggacgtttaaattgcaatgtcggctatacaact
tttgctactccagttcgtggacaggggtcagaccacaaagagttttcttcaatgcttcat
aaagctttggagggtgcaataatattggaaacttttccaaagactacagtggatgttttt
gcattggtgttggaatctgggggcagtgatcttcctgtagtgatatcatgtgctagcctt
gccctagcagatgcagggataatgatgtatgaccttgttacctcagtttctgtgtctggt
ctcggaaagaaccttgtcattgatcctattttggaggaggaaagctatcaagatggaagc
ctaatgcttacttgtatgccttctcgctacgaggtcactcagctaactattactggggaa
tggtcaaccccaaaaattaatgagggaatgcaaatatgcttggatgcctgctcaaaactt
gcagtagtcatgagggcgtgcttgaaaggacctgattctaccttagaagaatag
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