Prunus dulcis (almond): 117632345
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Entry
117632345 CDS
T07328
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117632345
04121 Ubiquitin system [BR:
pdul04121
]
117632345
Enzymes [BR:
pdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117632345
Membrane trafficking [BR:
pdul04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117632345
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117632345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING-like
Rad50_zn_hook
Prok-RING_4
DpnI
CxC4
Motif
Other DBs
NCBI-GeneID:
117632345
NCBI-ProteinID:
XP_034221682
LinkDB
All DBs
Position
6:5113744..5115172
Genome browser
AA seq
363 aa
AA seq
DB search
MATSSPSPTTSYWCYRCTRFVRVWVQDSTLSCPHCETGFLEEIETTPHPQPPPIHHHRRF
PSSHVHDQNPAPTSRRVRRAPVDRSSPFNPVIVLRGGAESNTESNSFELYYDDAAGSGLQ
PLPPTMSEILMGSGFDRLLDQLSQIEITGLGRPENPPASKSAVDSMPVVQIGETHVVSDA
HCAVCKEAFELGSEAREMPCKHIYHSDCILPWLAMRNSCPVCRHELPADRNDRTSDPGLD
EETMGLTIWRLPGGGFAVGRFSGGRRPGERELPVVYTEMDGPFNGNGAPRRVLWSSRSRG
SESRGIRRAFRNLASFWGRFRSNSSSSRSGSESGSVFSRSQSHSSSVFGRFVQRRSRAWV
LDD
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtcatcgccgtcgccgacgacgtcgtattggtgctacagatgcactcgcttc
gtccgtgtctgggtccaggactctaccctctcatgcccccactgcgaaaccggttttctg
gaagagatcgaaacgacgccgcacccacagccaccgccgatccatcaccaccgtcgattc
ccgtcctcccacgtccacgatcaaaacccggctccgacttcccgccgagtccgtcgggcc
cccgtggacaggtcctcccccttcaacccggttattgtcctacgtggcggggccgagtca
aatactgagtccaactcgttcgagctttactacgacgacgctgccgggtcggggctccag
cccctcccgcccaccatgtcggagatcttaatgggctcgggcttcgaccggttgctcgac
cagctctcccagattgaaatcaccgggctgggccgacccgaaaatccgcccgcgtctaaa
tcagccgtggactctatgcccgttgttcaaatcggcgaaacacacgtcgtgtcggatgcg
cactgcgcggtctgcaaggaagcattcgaactcgggtcggaggcccgagaaatgccgtgt
aagcacatataccactcggattgcatcctcccctggcttgctatgcgaaactcatgcccg
gtttgccggcacgagcttcccgccgaccgaaatgaccgaacttcggatccgggtctcgac
gaagagaccatggggctgaccatctggagattacccggcggtgggttcgctgtggggaga
ttctccggcggcagacgacccggagagagggaattgccggttgtgtacacggaaatggat
ggcccattcaacgggaacggggctccgagaagggtactatggtcatcgagaagtagagga
agtgagagtcgtgggattcgcagggctttccgtaatctggcgtcgttttggggtcggttt
aggtccaattcgtcttcttcgaggtccgggtccgaatccgggtcggttttcagcagaagt
cagagtcactcaagttcggtgtttggccggttcgtccagaggcgtagcagggcttgggtg
ttggatgattaa
DBGET
integrated database retrieval system
