KEGG   Prunus dulcis (almond): 117632465
Entry
117632465         CDS       T07328                                 
Name
(RefSeq) cyclin-H1-1-like isoform X1
  KO
K06634  cyclin H
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03022  Basal transcription factors
pdul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117632465
  09124 Replication and repair
   03420 Nucleotide excision repair
    117632465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdul03021]
    117632465
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117632465
Transcription machinery [BR:pdul03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     117632465
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     117632465
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B HEPN_RnaseLS
Other DBs
NCBI-GeneID: 117632465
NCBI-ProteinID: XP_034221836
LinkDB
Position
6:complement(27394217..27398907)
AA seq 337 aa
MADFQTSTHRAKWIFTPEELIGKYKAANQRAIQTLEKYGATLMEVDVDGTISYPEPQVIA
KDNADKHSRPKPISIEEEQFMRVFYENKLQEVCKNFHFPHKVQATALIYFKRFYLQWSVM
QHHPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPY
RSIEGFIDDMGEFCGINDDRLQILQNLLHAAKMEVDKIMLTDAPLLFPPGQLALAALRSA
NQVHKVVDFERYLRSILSRQSSEHTVSELVEFLNAIDSWARKYKFPSDKDLKHINRKLKS
CWGLSSHDESKKRDKKSKHKLKRSSNEVQPVPSHTEM
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggctgatttccagacctcgactcaccgagccaagtggatcttcacgcctgaagaactg
atcggtaaatacaaggctgctaatcaaagagcaatacaaacattggagaagtatggagca
acactaatggaagtagatgttgatggcacaatatcataccctgaacctcaagttattgca
aaagataatgctgacaagcattctcgtccaaaacccattagcattgaagaggagcagttt
atgcgggtattttatgaaaataaacttcaagaagtgtgcaaaaactttcacttccctcat
aaagttcaggcaacagctcttatatatttcaaaaggttttatctacaatggtcggtgatg
caacatcatccaaaaaatataatgttaacctgtatatatgcagcttgtaaaatagaagaa
aaccacgtatcagcagaggagcttggtaaggggatctcacaggatcatcaaatgatactc
aataatgagatgatagtttatcagagtttggaatttgatcttattgtttatgcaccatat
cgctcaattgaaggttttatcgatgatatgggggaattctgtggaataaacgatgatcga
ctccaaattctgcagaatttgcttcatgctgcaaagatggaagtggataaaatcatgctc
acggatgcaccacttctattccctcctgggcagttggcattggctgctttgcgtagtgca
aatcaggtgcacaaagttgttgactttgagagatacctgaggagcattctctctcgtcag
agttctgaacataccgtttcagagctagttgaattccttaatgcaatagattcttgggca
agaaaatacaagtttccttcagacaaggatctcaagcacatcaaccgaaaactgaaatct
tgttggggtcttagttcacatgacgaaagtaagaagcgggataagaaatcgaagcacaag
ttgaagaggagctcaaatgaagtgcaacctgtaccttctcatactgaaatgtaa

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