Prunus dulcis (almond): 117632540
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Entry
117632540 CDS
T07328
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117632540
Enzymes [BR:
pdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117632540
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
90S particles
Helicases
117632540
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
T4SS-DNA_transf
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
117632540
NCBI-ProteinID:
XP_034221934
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All DBs
Position
6:complement(22699657..22704087)
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AA seq
579 aa
AA seq
DB search
MEEGTSFLFAGVSFNRKKFAVDFSRFQKKKESEKTIEDLSFLEIAKPEAEQEEEEEEEPV
VPVKKRKRKAEVSEPVEGISVFKTSKSAKAAKKEIEKPLNERSEQKKKLNKQLERDSLLR
KDHNIHVSGNNIPSPLENFSELSSRYGCESYLLRNLAELGFKEPTPIQRQAIPVLLSGRE
CFACAPTGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELADQTTRECKKMAKGNKFY
IKLMTKELARNSDFSKRPCDILISTPLRLRLAIRKKKVDLSRVEYLVLDESDKLFELGLL
KQIDSVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNTASKTIKQKLVF
AGSEEGKLLALRQSFAESLNPPVLIFVQSKERAKELYGELLFENIRVSAIHSDLSQTQRE
NAVDDFRAGKTWVLIATDVIARGMDFKGVNCVINYDFPDSAAAYIHRIGRCGRAGRSGEA
ITFYTEADITYLRNIANVMSASGCEVPSWAMALRKQKWKKHRPGRESISTQPKDEQESTN
KKKKKDEQESINKKKRRKMSKNRAIVGGRELSLVHSSKT
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggcacttcgtttttgttcgccggcgtcagcttcaaccggaagaagttcgcc
gtcgatttctccagattccagaagaagaaagagagtgagaaaacgatagaagatttgagc
ttccttgaaattgcaaaacctgaagcagagcaggaggaggaggaagaggaggagccagtg
gtgcctgttaagaagaggaagcggaaggcggaagtttccgagcctgtggagggaatcagt
gtgtttaagacctcaaaatcagctaaggcagcgaagaaagagatagagaaacctctcaat
gaacgctcggagcagaaaaagaagttaaataagcaacttgagcgtgattcattattgaga
aaggatcataacattcatgtgtccgggaataacattccttcgccgcttgagaatttttcg
gaattaagctcaagatatggatgtgagtcatatttacttcgcaatttggctgaacttgga
tttaaagaaccaacaccaatccaaaggcaggctattccagtcctcttatctggccgggaa
tgctttgcttgtgctccaacaggatctggaaaaacccttgcttttgtttgccccatgctt
atgaaacttaagcatgcatctaaggatggcatccgagctgttattctttgtcctacacgt
gaattagctgatcagacaaccagagagtgcaaaaagatggcaaaaggaaataaattctac
atcaagttaatgactaaagagcttgcaagaaattctgatttttcaaaaagaccttgtgat
atactcatttctactccacttcgtttacggttggctatccggaaaaaaaaagttgattta
agcagggttgagtatctggtgttggatgagtctgataagttatttgagcttggcttgtta
aagcagattgattctgtggtcaaagcatgttcaaacccttcaataatacgatccttgttt
agtgctaccttacctgatttcgttgaagagcttgcacgcactataatgcatgatgctgtt
cgagttatcattggcaggaaaaatactgcttccaagactatcaagcaaaaactggttttt
gctggaagtgaagaagggaaacttttagcacttcgtcaaagctttgcagagagtctgaat
ccaccagtgttgatatttgtacaaagcaaggagcgagctaaggaactctatggagaactg
ttgtttgagaacataagagttagtgccatacattctgatttgtcgcaaacacagcgagaa
aatgctgttgatgacttcagagctggaaaaacatgggttttaattgccactgatgttatt
gctcgtggtatggatttcaaaggtgtcaactgtgtgattaattatgactttccagattct
gctgctgcttacattcacaggattggtcgatgtggaagagcagggaggagtggagaagct
attactttctacacagaggcagatattacatatttacggaatatagctaatgtgatgtcc
gcatcaggttgtgaggttccatcttgggccatggccttgcgcaaacagaagtggaaaaag
caccgtcccggaagagaatcaatatcgactcaaccgaaagatgagcaagaatctaccaac
aaaaagaagaagaaagatgagcaagaatctatcaacaaaaaaaagagaagaaagatgagc
aagaatagagcaattgtcggaggtagggagttatctctagtccacagttccaaaacatag
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