Prunus dulcis (almond): 117632698
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Entry
117632698 CDS
T07328
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
117632698
Enzymes [BR:
pdul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
117632698
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
MG2
RhgB_N
NOMO1-like_2nd
Motif
Other DBs
NCBI-GeneID:
117632698
NCBI-ProteinID:
XP_034222136
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Position
6:complement(20264453..20270839)
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AA seq
692 aa
AA seq
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MELLFCLCIHGLLKMSFNLKQWSWVLGSFAMLALFSLSRDDHGSVRTPPVRRELRSVSRR
DNTYNQMLSKTDNQVVLNNGLVQLTFSYPGGDVIGIKYKGIDNLLDIKNQPSNRGYWDLV
WNKPGEKGGVDKLQGTRFKVVRETSDQIEISFTKTYSRSLGNASVPLNVDKRYIMQRGRS
GFYAYSIFERLKGMPEVDMDQIRIVYKLQQDKFRYMAISDDRKRVMPTADDRANGLPLAY
PEAVLLTNPSNPDFRGEVDDKYQYSSEDKDNKVHGWICKDPAVGFWIITPSDEFRTAGPF
KQDLTSHVGPTALSMFVSTHYAGKEVGMTFQDGEAWRKVFGPVFIHLNSAPSSNEYLTLW
ENAKEQLVEEMQRWPYNFTQSKDFLSSDQRGSVAGQLLVRDRYRNKRLIWASSAYVGLAA
PGNAGSWQKESKGYQFWTEANKQGYFLIKDVRPGNYSLYATVPGFIGDYKYEANITIEPG
KEINLADLTYEPPRNGPTLWEIGIPDRSAAEFNVPDPSPTLMNQLYTNHTDKFRQYGLWE
RYSDLYPNHDLIYTVGTDNYPDDWFFAHVTRNKGNQTYEPTTWQIRFQLNKGANPGNYTL
QLALASATNAEVQVRVNDWSANPPHFTTGLIGKDNAIARHGIHGLYWLFSVGLRNDRLQE
GNNTIYLTQSRHKTTFDGIMYDYLRLEGPPQE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggagctattgttctgcttgtgtattcatgggttgttgaagatgtcatttaacctaaag
caatggagctgggttcttgggtcattcgcaatgcttgccttgttttccttgtcccgtgac
gatcacggttccgtgaggacccccccagtaagaagagaactaaggagcgtttctagacga
gataatacgtacaatcagatgctatcgaagactgataatcaggtggtgcttaataatggc
cttgtccaactcactttttcttatcccggaggagacgtcattggaatcaagtacaaggga
attgataacttgcttgacatcaagaaccagccaagcaatagagggtactgggatcttgtc
tggaacaagccaggagaaaaaggtggtgtggacaagctacaaggaacaagatttaaagtt
gttagagagacgtcagatcaaatagagatttcttttactaaaacctacagtcgttccctc
ggtaacgcctcagttcccttgaatgttgacaaaaggtacataatgcagcgcggtcgctct
gggttttatgcctactccattttcgagcgcctcaaagggatgccggaggtagatatggat
caaattagaattgtttacaagcttcaacaagacaaatttcggtacatggctatatctgac
gacaggaaaagggtcatgccaacagccgatgaccgtgcaaatggtctgccccttgcctat
cccgaagctgttcttttaaccaatcccagcaatcctgactttagaggagaggtggatgac
aaataccaatactcaagtgaggacaaagataacaaggtccatggttggatttgtaaagac
ccagctgtgggcttctggatcatcacacccagtgatgagttccgtaccgctgggcccttc
aagcaggacctcacctcccatgtgggcccaactgccctctctatgtttgtcagtacccat
tatgctgggaaggaagttggaatgacatttcaagatggtgaggcatggaggaaagttttt
gggccagtctttatccatctcaattcagctccaagctcaaatgaatatctcacactctgg
gaaaacgctaaagagcagttggttgaagaaatgcaaagatggccatacaatttcactcaa
tcaaaagactttctcagctctgatcagcgtggatccgttgccggtcaattactagttcgg
gatcggtacaggaataagaggcttatttgggcaagctccgcttatgtgggattggctgca
cctggaaatgcaggatcatggcaaaaggaaagcaagggttatcagttctggactgaagcc
aacaaacaaggttatttcctcattaaagatgttcgacctgggaactatagcttgtatgca
actgttcctggctttattggggattacaaatatgaggctaatattacaattgaaccagga
aaagaaattaatttggctgatcttacttacgaacctccaagaaatggcccaaccctgtgg
gaaatcggcatcccggatcgatcagctgctgagttcaacgtaccagatccgtctccaacc
cttatgaaccaattgtacaccaatcacacagacaagtttaggcaatacggcttgtgggaa
cgatactcagatttataccctaaccatgatctcatctacaccgttggtactgacaattac
cctgatgattggttcttcgctcatgtgaccaggaacaaaggaaatcaaacgtatgaacca
accacatggcaaattcgatttcaacttaataagggggcgaatcctggaaattatacactg
caattggcattggcctcagccactaatgcagaagtgcaggttcgggttaacgattggagc
gcaaacccacctcattttacaacagggctaatcgggaaggacaatgccatagcaagacat
ggaattcatggtttgtactggttgttcagtgttggtctacgaaacgatcggctacaagaa
ggaaacaacaccatctatcttactcagtcaagacacaagacaactttcgacggcatcatg
tatgactatctgcgattagaaggacctcctcaagagtga
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