| Entry |
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| Name |
(RefSeq) general transcription factor IIH subunit 2
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| KO |
| K03142 | transcription initiation factor TFIIH subunit 2 |
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| Organism |
pdul Prunus dulcis (almond)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pdul00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117632813
09124 Replication and repair
03420 Nucleotide excision repair
117632813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pdul03021]
117632813
03400 DNA repair and recombination proteins [BR:pdul03400]
117632813
Transcription machinery [BR:pdul03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117632813
DNA repair and recombination proteins [BR:pdul03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117632813
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
6:complement(6812459..6815552)
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| AA seq |
420 aa
MNNGEQRRLNGEAEEDEDEDDANNGGLAAWERAYADERSWESLQEDESGLLQPIDNQSLK
HAQYRRRLRAASTARIQKGLIRYLYIVIDLSKAAAEMDFRPSRMGVVAKHVEAFIIEFFY
QNPLSQVGLVTIKDGVAHCLTDLGGSPNSHVKALMGKLECSGDSSLQNALDLVHGYLEQI
PSYGHREVLILYSALSTCDPGDIMETIQKCKKSKIRCSVIGLSAEIFICKHLCQETGGLY
YIALDEPHLKELILEHAPPPPAIAEFAIANLIKMGFPQRAAEGSVAICSCHKEAKVGGGY
TCPRCKARVCDLPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSPSLLIDQQNKFPRA
CFGCQQSLLNPGNKPSLRVACPKCKQHFCLDCDIYIHESLHNCPGCESARHSKIPNANKG |
|---|
| NT seq |
1263 nt +upstreamnt +downstreamnt
atgaacaacggcgagcaaagacgcttaaatggagaggcagaggaagacgaagacgaagac
gatgcaaacaatggaggcctcgctgcttgggaacgagcctacgctgatgagaggtcatgg
gagtcactgcaagaggacgagtctgggcttcttcagcccattgacaaccagagccttaaa
catgctcagtaccgtcgtcgccttcgtgctgcctccactgctcgaattcaaaagggtctt
attcgttatctttacattgttatcgacctctctaaggctgctgcggaaatggattttcga
ccaagccgaatgggcgtggttgcaaaacatgttgaggctttcattatagagtttttttac
cagaatccgcttagtcaagttggcctggtgactataaaagacggtgttgctcattgctta
acggatcttggtggcagtcccaattctcatgttaaagctttgatgggtaagctggaatgc
tcaggtgactcgtccctacagaacgcattggatcttgtacatgggtatctggaacagatt
ccatcatatggtcatagagaagttctgatcttatattcagctctcagtacctgtgatcca
ggagatataatggaaactatccagaaatgtaagaaatccaaaattaggtgctcagttatt
ggtctctcagcagaaattttcatatgcaaacatctatgccaggaaactggtggcttgtac
tatattgcattggatgagccacacttaaaagagttaatcttggaacatgcacctccacca
ccagcaatagcagaatttgcaattgctaatttgataaagatgggcttcccacaaagagcg
gcagagggctctgtggcaatttgttcatgtcacaaggaggcaaaggtcggaggtggatac
acttgtccaaggtgcaaggcacgtgtatgtgacctacctactgaatgtcgcatttgtggg
ttgacgcttatttcttctcctcatttggcaaggtcttatcatcatcttttccccattgtg
ccatttgatgaggtctctccgtcactactaattgatcaacaaaacaagtttcctagagct
tgttttggctgccaacagagtcttctcaatcccggaaacaaacccagccttcgtgttgct
tgtccaaaatgcaaacagcacttctgccttgattgtgacatttatattcatgaaagcttg
cataactgcccaggttgtgagagcgctaggcattccaagataccaaatgctaacaaagga
tga |
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