Prunus dulcis (almond): 117632975
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Entry
117632975 CDS
T07328
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117632975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117632975
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117632975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_14
RNA_helicase
Rad17
AAA_33
ATPase_2
AAA_2
Viral_helicase1
NPHP3_N
Vps4_C
TsaE
NACHT
AAA_18
AAA_28
nSTAND3
IstB_IS21
Bac_DnaA
DUF815
TIP49
AAA_17
Mg_chelatase
ABC_tran
NB-ARC
AAA_3
Parvo_NS1
AAA_11
Cytidylate_kin2
AAA_7
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
117632975
NCBI-ProteinID:
XP_034222518
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All DBs
Position
6:624180..627494
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AA seq
712 aa
AA seq
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MTLSPSLSLAKPGWVWFGFSAGLRPTLNQTKPYFLNGAICSSGMKSIHSASCSPQLFRIR
SESLIKPFANHNRDYSDSASAPASASASVSISVSVSASTSPSPSDPDSPSDPASPSDSDS
DSDFDSDRDSDSDSKEAKCNEAKRDVKGPRFKDLGGMKKVLEQLEDVICRLRFPKLAKSL
GGNPISGILLHGPPGCGKTQLAHAIANETGFSFHNVSAPSFINSYYGESERNIRRLFSEA
YETSPSIVFIDEIDSIASKREDSSYVTALAQLLTCMDEQRSHNVLVIAATNRPDALDPAL
RRPGRFDLEISFNVPDESDRVEILKVVTSNLGLEGPLDLVKIARSTAGYVGADLRAVADR
ACDIARKRILAERYPNMSIASMNEANYNEDWVEKEKEKLAITVADFEKAIQEVQPSLRRE
GFSAVPNVKWEDVGGLDTLRHEFNLHIVNRMKYPDIYKEFGMNLETGFLLYGPPGCGKTL
IAKAVANEAGANFIQVKGPELLNKWVGESEKAVRTLFSRARACTPCILFFDEVDALTTKR
GQEGGQNVELLLNQLLVELDGGDQRKGVIVIGATNRPDVMDPAVLRPGRFGKHIYVPLPS
KDERGFILKALARNKPIDSRVDLSEIGQRNACENFTGADLAALMHEATMAAVEEKVTSIA
SSDSSPCTIKETHFEKALAKITPSLTDEDLQDYQIFGENRANGFKAKKFAFC
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacactctctccttctctttctcttgccaaacccggatgggtttggtttggtttctcc
gctggtttgaggccaacactgaaccaaaccaaaccgtatttcttgaacggtgcaatctgc
agttcagggatgaaatccatccattctgcgtcgtgctcaccacaactttttcgtattcgt
tcggagtccttgataaagcctttcgctaaccataacagagattattctgattctgcctcc
gcccctgcctccgcctccgcctctgtctctatctctgtctctgtctctgcctctacctct
ccctctccctccgaccctgactctccctccgaccctgcctctccctccgactctgactct
gactctgacttcgactccgacagagactctgactctgattccaaagaggccaagtgtaac
gaggccaaaagggatgtgaaaggcccgagatttaaggacctaggtggaatgaagaaggtg
ctagagcagctggaagacgtgatttgcaggcttcggtttccgaagctggcaaagtcgctc
ggaggcaaccccatatctggaattctcttgcatggaccaccaggctgtgggaagacccaa
ctggctcacgccattgccaatgaaaccggcttttcctttcataacgtttctgccccaagc
ttcatcaatagttactatggtgaatctgaaaggaatatacgaaggcttttttccgaagcg
tatgaaacgtcgccttcaattgtgttcatcgacgaaattgattctattgcttcaaaaaga
gaggactcaagttatgtaacggcattggcacaactgctgacttgcatggacgaacagaga
tcgcacaatgttcttgtaatagcagctaccaatagacctgatgctcttgaccccgctctg
aggaggcccgggcgatttgatcttgagatttctttcaacgttccggatgaaagtgacagg
gttgagattcttaaggtggttacgagcaatttaggccttgaaggtcctcttgatcttgtt
aaaatagcgcggtctacggcagggtatgttggagctgatttgagagctgtggctgacaga
gcttgtgatattgccaggaaaaggatactagcagagaggtatcctaatatgtcaattgct
tctatgaacgaggcgaattacaatgaagattgggtggagaaagaaaaagaaaagctcgcc
atcacggtggctgattttgagaaagcaattcaagaggttcagccttccttaagaagagaa
ggattctctgcagtccctaatgtgaaatgggaagatgttggcggtctagatactttaagg
cacgaatttaaccttcatatagttaatcgtatgaagtatcctgacatctataaggaattc
ggaatgaatctagagacgggttttctgctctatgggcctccaggatgcggtaaaacactg
atagccaaggctgttgcaaatgaggcaggagccaacttcattcaagttaagggccctgaa
cttctaaataaatgggttggagaaagtgagaaggcagttcgaacattgttcagccgtgca
agggcatgcacaccatgcatacttttctttgatgaggtggatgctttgacaacaaagcga
ggacaagaaggagggcagaatgttgagctgctattgaaccagttacttgtagagttggac
ggtggagaccagcggaagggtgtaattgtcattggtgccactaatagaccggatgtaatg
gaccctgctgttttgcgacccggaagatttggtaagcatatttatgttcccctgcccagt
aaagatgagcgtggtttcatcttaaaagctcttgcaaggaacaagcctatagattcccgt
gtagatctgagcgagattggacagagaaacgcatgcgaaaattttactggagctgatctt
gctgcactgatgcatgaagctaccatggctgctgttgaagagaaagtgacatcaatcgcg
agttcggattcatctccctgcacaatcaaagaaactcactttgagaaagcactggctaaa
atcacaccatctctaacagacgaggatttgcaagactatcagatatttggcgaaaacagg
gctaatggattcaaggccaaaaagtttgccttttgttag
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