Prunus dulcis (almond): 117633040
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Entry
117633040 CDS
T07328
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117633040
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117633040
Factors involved in mRNA localization
Other mRNA localization factors
117633040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
117633040
NCBI-ProteinID:
XP_034222602
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All DBs
Position
6:28945300..28957595
Genome browser
AA seq
1284 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDEQAEIQGPGIWVSTDSGATDSPVEYSDVSAYRLSLSEDTKA
LNQLNALIQEGKEMGSVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREI
QRWQASAAAKLAADMQRFSRPERRINGPTVTHLWSMLKLLDTLVQLDHLKNAKASIPNDF
SWYKRTFTQVSVQWHDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FTVESLELDFALLFPERHILLRVLPILVVLATSSEKDSESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAIMKELSIYFQRFSTQTRLLSLPSPHELPSREAQDYQRHYLIINHIGSI
RAEHDDFAIRFSSSMNQLLLLKSTDSADIDWCKEVKGNIYDMVVEGFQLLSRWTARIWEQ
CAWKFSRPCKDIVPSESQEASASFSDYEKVVRYNYSAEERKALVELVSYIKSIGSMMQCS
DTLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTSKSE
SGSLQQGGEESKANFFYPRPVAPTAAQVHCLQFLIYELVSGGNLRKPGGLFGNSGSEIPV
NDLKQLETFFYKLSFFLHMLDYSVTVATLTDLGFLWFREFYLESSRVIQFPIECSLPWML
VDYVLESHNAGILESVLMPFDIYNDSAQQALVSLKQRFLYDEIEAEVDHCFDIFVSKLCD
SIFTYCKSWAASELLDTSFLFALDNGEKYSVEPMRFTALLKMTRVKLLGRMIDLRSLIAE
RMNKVFRDNIEFLFDRFESQDLCAIVELENLLDILKHAHGLLSRDLSIDTFSLMLNEMQE
NISLVSYCSRLASQIWSEMQNDFLPNFILCNTTQRFIRSSKVPLVPIQKPSVPYAKPNFY
CGTQDLNAAHQSFARLHSGFFGMPHIFSIVRLLGSRSLPWLIRALLDHISNKIATLEPMI
TGLQEALPKSIGLLPFDGGVTGCMRLVKEQLNWGTKSQLKAEVLRGIKEIGSVLYWLGLL
DIVLRETDTTHFMQTAPWLGLLPGADGQILHSQDGGESPIVNLFKSATSVIVSNPGCPNP
TSFHTLSKQAEAADLLYKANMNTGSVLEYALAFTSAALDKYCSKWSAVPKTGFIDITTSK
DFYRIYSGLQIWYLEDSVRVPPSSHEVLGDSVAWGGCTIIYLLGQQLHFELLDFSYQVLN
VAEVEIASITQTHKSPHFFQGWDGLLEVMKKARRLNNHVFSMLKARCPLEDKTACAIKQS
GAPLHRIKFENTVSAFETLPQKEA
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcctgtggaagaggccattgccgccctgtctacattctcactcgaggatgag
caagcagagatacaaggaccgggaatttgggtttcaactgatagcggcgcaactgatagc
ccagttgagtatagcgatgtttctgcatatcgcctatctctgtcagaagacacaaaagct
ctcaatcagctgaatgctcttatccaagaggggaaggagatgggatcagtgctttataca
tatcgcagttgtgtcaaggcacttcctcagcttcctgattctatgaaacagagtcaagct
gacttgtatctagaaacatatcaagttctggacttggaaatgagtcgtctacgtgaaata
cagcgatggcaagcgtcagctgctgcaaagctagctgcagatatgcaacgcttttctagg
cccgagcgacgcattaatggccctacagtaactcatctctggtccatgctgaagctactt
gacactctggtgcaacttgatcatctcaaaaatgcaaaagcaagcatacctaatgatttc
tcttggtataaaaggacattcacacaagtaagtgtacagtggcatgatactgattcgatg
agagaggagttagatgacttacagattttccttagcacaaggtgggctatcttattgaat
ttgcatgttgagatgttccgcgtgaacaacgtagaagatatccttcaagttcttatagtc
tttactgttgagtcattagagctggattttgcacttctgttccctgagcggcacattctt
cttcgtgttttgccaattcttgttgtcttagcaacatcatctgaaaaagatagtgagtcc
ttgtacaagagagtgaaaatcaacaggctgatcaatatatttaagaatgatccagtaatt
cctgcatttccagatctccatctttctccagctgcaatcatgaaagaattgtcaatatac
ttccagaggttttccacccaaactcgtcttctcagtcttccatcacctcatgagcttcca
tctcgtgaggcacaagattatcagagacattatctaattatcaatcacattggatccata
cgcgcggagcatgatgactttgcaattcgtttttcttcctccatgaatcagttattattg
ctgaagtcaacagacagtgctgatattgactggtgcaaagaagtgaagggaaatatatat
gatatggttgttgaaggttttcagcttttaagtagatggactgcacgcatttgggaacaa
tgtgcatggaagttttctcgcccgtgcaaagatatagttccttccgagtcacaagaggct
tcagcatcattttcagactatgaaaaggtggtacgatataattatagtgcagaggaaagg
aaagcactggttgaactagttagctacataaagagcattggatcaatgatgcagtgcagc
gacacattggtagctgatgctttatgggagacaattcatgctgaggtccaggattttgtt
cagaatacactggccactatgttgcgaactaccttccgaaagaaaaaggacctttctagg
atcctttctgatatgcggactctttcggcagactggatggcaaatacaagcaagtctgag
tctggatccctacaacaagggggtgaagaaagcaaagcaaactttttttacccaaggccg
gttgcaccaacagctgctcaggtccactgcttgcagttccttatatatgaactagtgtct
ggcggtaatcttaggaagcctggagggctttttgggaatagcggatctgagattcctgtt
aatgacctaaaacagttggaaacatttttttacaagcttagcttcttcctgcatatgttg
gactactcagtgacagtggccacgttgacagatcttggtttcttatggtttagagaattt
tatttggagtcttctcgtgttattcagtttcccattgaatgctctctaccctggatgttg
gtggattacgtgcttgagtcacacaatgcaggtatcctagagagtgttttgatgccattt
gacatctataatgattcagctcagcaagcactggtttcgctcaagcaacgattcctctat
gatgaaattgaggctgaggtggaccattgttttgatatatttgtttcaaagctttgtgat
agtattttcacatattgcaagagctgggcagcaagtgagctacttgacacgtcattcctc
tttgcattggacaacggagaaaaatattctgtcgagcctatgaggtttaccgcactacta
aagatgaccagagtgaagttgcttgggaggatgattgatttgagaagtttaattgctgag
cggatgaacaaagttttcagagataatatcgagtttctatttgatcgttttgagtctcag
gatttatgtgctattgtggaattagaaaatctgctggatatcttgaagcatgcccatgga
ttgctatccagagatctctcaatagacacattcagtctcatgttgaatgagatgcaagaa
aacatatctcttgtgtcatattgtagtcgacttgcttcccagatttggtcagagatgcaa
aacgatttcttgccaaatttcatcctttgcaatactacccagcgtttcatccgatcatca
aaggttcctcttgttcctattcaaaagccatcagttccctatgccaagcctaatttctat
tgtggtactcaagacttaaatgcagctcatcagagttttgcacggttgcacagtggattt
tttgggatgccccacattttttcaattgttaggcttctagggtctagatcattgccctgg
ctaattcgagcacttctagatcatatatcaaacaagatagctacactggaaccaatgata
acaggactgcaggaagcattgccaaagtctattggattgcttccctttgatggaggcgtg
acaggttgtatgaggcttgttaaagaacaacttaattggggaactaaatcacagctcaaa
gcagaagttcttcgggggataaaggagattggaagtgtattgtattggctggggcttctt
gatatcgtgctgagggaaacagataccactcacttcatgcaaacagccccttggttgggc
ttgcttcctggtgcagatggacaaatattgcattctcaagatggtggagaaagcccaatc
gtcaacctctttaaatcagctacttctgtaattgtgtcaaaccctgggtgcccaaaccca
acttccttccacaccttatcaaaacaggcagaagctgcagatcttttgtacaaggctaac
atgaatactggaagtgtgctggaatatgccttagcttttactagtgcggctctggacaaa
tattgtagtaaatggagcgctgttcccaaaacagggttcattgacatcacaacttcgaag
gatttctatcgtatatacagtggtcttcaaatttggtatctagaggattctgttcgagta
ccaccaagcagtcatgaagtgctgggtgattctgtagcttggggtggctgcaccataata
tacttactcgggcaacagctgcattttgagctcttggatttttcataccaggtcctcaat
gttgccgaagtggagattgcatcaattacccaaacccataagagccctcattttttccag
ggatgggacggcctgttagaagtaatgaagaaagcaaggaggctaaacaatcacgtgttc
tccatgttaaaggcacgatgcccgcttgaagacaagacagcttgtgccatcaagcaaagt
ggtgcccctctgcatcggatcaagttcgagaacaccgtctcagcatttgaaacactacca
cagaaagaggcctga
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