Prunus dulcis (almond): 117633268
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Entry
117633268 CDS
T07328
Name
(RefSeq) mRNA-decapping enzyme-like protein isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117633268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117633268
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117633268
mRNA degradation factors
5'-3' decay
Decapping complex
117633268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
117633268
NCBI-ProteinID:
XP_034222886
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All DBs
Position
6:10943143..10948124
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AA seq
356 aa
AA seq
DB search
MAQNGKLRPNLDQQSTKLLNLTVLQRIDPFIDEILITATHVTFYEFNTDLSEWSRKDVEG
SLFVVKRNAQPRFQFIVMNRRSTENLVEDLLGDFEFEVQVPYLLYRNAAREVNGIWFYNA
SECEDVANLFSRILGAYSKVSSTKSEFEELEAVPTIAFMDGPLEPSSSTACIVTDVPDDP
AFVNFFSTATTIVNSSTTTITGQPYQPSSTISLPSHPVGVAPSPIPSMQISSATLAPFLD
IPESHSNTKLVNNLVKPSSFFVPPSSSPTSMPRVSSSVPTAPHLHPAVSLQRPYGAPLLQ
PFPPPAPPPSLTPASFPILNCGPVNRDKVRNALMLLVQDNHFIDMVYGALLNAHHS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaacgggaaattaaggccaaatctggaccagcagagcacaaagcttctcaat
ctaactgttctccagcgaatcgacccatttatcgacgaaattctcatcacagcaactcat
gtcaccttctacgagttcaacactgacctcagcgaatggagtcgcaaggacgtcgaagga
tctctcttcgtcgtcaagaggaatgctcaacctcggtttcagtttattgtgatgaatcgc
cggagtactgaaaatttggtggaggatcttttgggagattttgaattcgaagttcaggtt
ccatatcttttgtatcgaaatgcagcccgagaggtcaatggtatttggttctacaatgca
agtgaatgtgaagacgtggcaaatctttttagcaggatacttggtgcatattccaaggtg
tcatcgacaaagagcgagtttgaggaactggaagcagtcccaactatagcttttatggat
ggtcctttggagccatcatcatcaactgcctgcattgtcacagatgttccagatgatccg
gcctttgtgaacttctttagtacggctacaactatcgtgaattcttcaactacaacaatt
actggacagccttaccagccttcttcgacaatctctctaccttcccatccagtcggagtt
gccccttcccctattcctagcatgcagatatcatctgcaactttagcccctttccttgac
atccctgaatcccacagcaacaccaaactggtcaataatcttgtaaagccatcttcgttt
tttgttcctccttcctcttcaccaacatcgatgccacgtgtctcttcatcagtgcctact
gctcctcatcttcaccctgctgtaagtctacaacgtccatatggtgctcctttgttacaa
ccttttccaccaccagctcctccaccatctctcactcctgcttcttttcctatcctgaac
tgtgggccagttaacagagacaaagttcgaaatgcactcatgctgcttgtgcaggacaat
catttcatcgacatggtatatggagcactcctgaatgcacaccattcataa
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