Entry |
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Name |
(RefSeq) pre-mRNA-processing protein 40A
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KO |
K12821 | pre-mRNA-processing factor 40 |
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Organism |
pdul Prunus dulcis (almond)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pdul00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117633346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:pdul03041]
117633346
Spliceosome [BR:pdul03041]
Complex A
U1 snRNP components
U1 related factors
117633346
Complex B
117633346
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
1:32972852..32983489
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AA seq |
1031 aa
MANNPQSSAAQPFRPPPVASLGPQSFGSSPSLQYRPVVPTQQGQQFIQSASQQFQPVGQG
IPSSNVGMPASQSQQLQFSQPMQPYPLRPSQPGHATPSSQALPMQYMQTRPITSAPSQSQ
QPALPFNNQMPGLAGGGMPYSSSYMFAPPSYAQPQNNVSSSSQFQPISLVQAHVSVTGHP
WVSSGNQGAAVPTPVPQSSQQPSSTTFTDSAVNVPSQTQQSSSDWQEHTSGDGRRYYFNR
RTKQSSWEKPLELMTPMERADASTVWKEYTSSDGKKYYYNKVTRESKWTIPEELKLAREQ
AQRELAQGTRSEMNLTSHAPPAVASAETPMGSSSVGPSTSSALPGMVSSPVAVIPVSSFS
NPSPIAPTGSSVASGAQSSITGGVGIQPPVVTLTPPPASVSGSTGVPPTLVNAITKSVST
FENVTSQDIGSADDGAFTQDIEEAKRGMAVAGKVNVTPSEEKTVDEEPLVYANKQEAKNA
FKALLESANVHSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLENEERRMR
QKKAREEFSKMLEESKELTSATRWSKAVSMFENDERFKAVERARDREDLYESYIVELERK
EKEKAAEDHKQNIAEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLDRLLIFQDY
IRDLEKEEEEQKKIQKEQLRRVERKNRDEFRKLMEEHVADGTLTAKTYWRDYCMKVKDLF
SYEAVASNTSGSTPKELFEDVAEELEKQYHEDKARIKDAMKLGKVTLASTLTFEEFKVAI
LEDIGFPSISDINFKLVYEELLERAKEKEEKEAKKRQRLGDDFNKLLHTFKEITASSNWE
DCKHLFEETQEYRSIGEENFSREVFEEYITNLQEKAKEKERKREEEKAKKEREREEKEKR
KDKERKEKEREREKEKGKERSKKDETDSENVDVTDSHGHKEDKKREKDKDRKHRKRHQSS
MDDVGSDKEEKEESKKRRHSSDRKRSRKHTPESDSESRHRRHKREHQDGSRRNGGYGELE
DGEVGEDGEIQ |
NT seq |
3096 nt +upstreamnt +downstreamnt
atggctaataaccctcagtcctcagctgcgcagccatttcggcctcctccagttgcttcc
ttgggtcctcaaagttttggttcatccccatctcttcaatatcgaccagtggttccaaca
cagcaagggcaacagtttattcaatcagcctcccaacagtttcagcctgtgggacaaggt
attccttcttcaaatgttgggatgcctgctagtcaaagtcagcaattacaattttctcaa
ccaatgcaaccgtatcctctcaggccaagtcagcctggtcatgctacaccttcgtcacag
gctttgcctatgcaatacatgcagacgaggccaattacgtctgccccatcacagtctcag
caacctgccctaccttttaataatcagatgcctggcttagctggcggcggaatgccttat
tcttcatcatatatgttcgcaccaccttcatatgcccagccacaaaataatgtcagttct
tcgtcccagtttcagccaatttctctagtgcaagcacatgtatctgtcacaggacatcct
tgggtgtcctctggtaatcagggtgcagcagttcctacaccggtaccgcagtccagtcaa
caaccttcaagcactactttcacagattctgctgtaaatgttcctagccaaacacagcag
tcttcttctgattggcaagagcatacgtcgggtgatggaagaagatattatttcaacaga
agaacaaaacaatctagttgggagaagcctttagaattgatgacaccgatggagagagcc
gatgcatcaactgtttggaaggaatatacgtcttcagatgggaaaaagtattattacaac
aaagttacaagggaatctaagtggacaattccagaggagttaaagttggctcgtgaacag
gctcaaagagaacttgcccagggaacacgttcagaaatgaatttgacttctcatgcccct
cctgctgttgcttcagctgaaacacctatgggatctagttcagttggccccagcacttct
tcagccctacctgggatggtatcgagcccagttgcagttatacctgtgtcttccttttct
aatccttcccccattgcgcctactggatcatcagttgcttctggtgcacagtcttccata
acaggtggcgttggcattcagcctcctgtggtgactcttactccaccgcctgcttctgtt
tcagggagtactggagttcctcctactttggtcaacgccattacaaaatcagtgagtacc
tttgaaaatgtaacatctcaagatattggaagtgcagatgatggagcttttactcaagat
atcgaggaagcgaaaagaggaatggcagttgctggaaaagtcaatgtgactccgtcagag
gagaaaacagttgatgaagaaccattggtgtatgccaataagcaggaggcaaaaaatgca
tttaaagcacttctggaatctgcaaatgtacactccgattggacttgggagcagacaatg
agagagatcattaatgacaaaagatatggtgctttaaaaactctaggcgagaggaagcaa
gcatttaatgagtacttgggtcaaaggaaaaaactcgagaatgaagagaggcgcatgagg
cagaaaaaagctcgggaagaattttcaaaaatgttggaagagtccaaggaacttacgtca
gcaaccagatggagcaaagctgtcagtatgtttgaaaatgatgaacgattcaaggctgta
gaacgagcgagggaccgggaagatctttatgagagctacattgtagaattggagaggaag
gaaaaagaaaaggcggctgaagatcataagcagaatattgcagagtatagaaaattcctg
gaatcttgtgattttatcaaggtgaacagccagtggcggaaagttcaagatcgcttagaa
gatgatgagagatgcttgcgtcttgaaaaacttgacaggttgctcattttccaggactat
attcgcgaccttgagaaggaagaagaggagcaaaagaagatacagaaggaacaattgagg
cgggttgagaggaaaaaccgcgatgagtttcgaaagctgatggaagaacatgttgccgac
ggtactcttacagctaaaacttactggcgcgattactgcatgaaggttaaggacctgttt
tcgtacgaagctgttgcatctaatacctctggttcaacaccaaaagaattgtttgaggat
gttgctgaagaattagagaaacagtatcatgaagataaagctcggataaaggatgcaatg
aagttggggaaggttaccctggcttctacactgacatttgaagaatttaaggttgctatt
ttggaagatattggtttcccatcaatatcagacattaactttaagcttgtatatgaggaa
ttattagagagagcgaaggagaaggaggagaaagaagcaaagaagcgtcaacgactaggt
gacgacttcaataagctattgcacacattcaaggaaataaccgcttcttctaattgggaa
gattgcaaacaccttttcgaagaaacccaagaatacagatcaattggggaagagaacttt
agtagggaagtttttgaggaatatattacaaacttacaggagaaggctaaagagaaagaa
cgcaagcgagaggaggaaaaggctaaaaaagagagagagagagaggagaaagagaagcgt
aaggataaagagaggaaggagaaggagagagaacgtgaaaaagaaaagggaaaagaacgg
tctaagaaggatgaaacagatagtgaaaatgtagacgtaactgatagtcatggtcataaa
gaagataagaaaagggagaaagacaaagatagaaagcaccggaagcggcatcaaagttcc
atggatgatgtaggttctgataaggaggagaaagaagagtctaagaaacgcagacatagt
agtgaccgcaaaagatcaagaaaacatacacctgaatctgacagtgaaagtcggcataga
agacacaagagagagcatcaggatggttcacgtcgaaatggtggatatggggaacttgaa
gatggggaggttggtgaagatggggaaattcagtag |