Prunus dulcis (almond): 117633766
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Entry
117633766 CDS
T07328
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117633766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117633766
Spliceosome [BR:
pdul03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117633766
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR19_1st
PRP4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_like
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
WDR54
Motif
Other DBs
NCBI-GeneID:
117633766
NCBI-ProteinID:
XP_034223417
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Position
7:complement(7383119..7387163)
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AA seq
529 aa
AA seq
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MTMEEDKPSTTVAEPSVAAVPIAPVRPPVPRPPAPQNGEARASTSDSDSDSAGPPRATGV
SGAEYEISEESRVVRERQEKAIQELLMKRRASALAVPTNDMAVRARLRRLGEPITLFGER
EMERRDRLRMIMARLDSQGELEKLLKVHEEEEAAASAALEDGDDQMVQYPFYTEGSKALM
NARIDIAKYSIKRAASRLERARRKKDDPDEDMDAELDWALRQASSLELDCSEIGDDRPLS
GCSFSHDGKLLATCAISGVAKLWSMPEAKKFATLKGHTERLTDVQFSPVHNLIATASADR
TAKLWNTEGSQLVTFKGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETSEELLLQEGH
SRSVYGIAFHPDGSLVASSGLDALARVWDLRTGRSILALEGHVKKVLALSFSANGYYLAS
GGEDNTCRIWDLRKKKSIYIIPAHSNLISQVKFEPQEGYFLVTASYDLTTKIWSARDFKP
VRTLSGHEAKVTSLDIAGDGHQIATVSHDRTIKLWSSSTNEKDQAMDVD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgactatggaggaggataaaccttcaacaactgtagcagagccatctgttgcagcagtc
ccaattgctccagttcgacctcccgtaccgaggccgcctgcgccacaaaatggtgaagcg
agggcgagtacgagcgactctgattccgattcggcgggccctccccgagccaccggcgtt
tcgggtgccgaatacgaaatatcggaagagagcagagtggtgagagagcgacaggagaaa
gcaattcaagaactgttgatgaagcgccgtgcttctgctcttgctgttcccactaacgac
atggctgtgagggctcgtcttcggcggctcggcgaacccattactctttttggagaaaga
gagatggagaggcgagacaggttgaggatgatcatggcaaggcttgattcgcaaggcgag
ttggagaagttgttgaaagttcatgaggaggaggaggctgccgcttctgctgcattggaa
gatggtgatgatcaaatggttcagtaccctttttacactgaaggatccaaagctttgatg
aatgcgagaattgacattgcaaagtactccattaagagggcagcttcgcggcttgaacgg
gctcgaaggaagaaggatgacccagatgaggatatggatgcagagttggactgggctttg
aggcaggcatcaagtttggaacttgattgtagtgagattggggatgataggccactttct
ggttgttctttctcacatgatggaaaactgcttgccacttgtgctataagtggagttgcc
aagttgtggagcatgcctgaagcaaagaagtttgccaccttgaagggacacacagagcgc
ctgactgatgttcagttttctcctgtgcataacctcatagcaactgcttctgctgacagg
actgcaaagttgtggaacactgaaggatctcagctggtgacctttaagggccatttggac
cgtcttgcacgtattgccttccatccatcaggaaaatatttaggtacaactagctttgac
aagacatggaggctatgggatgtagaaactagtgaagagttgcttcttcaagaaggtcac
agtaggagtgtctacgggatagcattccaccctgatggatcattggtggcatcttctgga
ctggatgcacttgctcgtgtttgggacctccgtacgggtagaagtattcttgccttggaa
ggccatgtcaagaaagttctagcactcagtttctcagcaaatggctattatttagccagt
gggggtgaagacaacacttgcaggatatgggatttaagaaaaaagaaatccatatacatc
attccagcacattccaatctcatatcacaggtcaaatttgagcctcaagagggatatttc
ttagtaactgcttcatatgatttgacaacaaagatatggtcagcccgagattttaagcct
gtcaggacgctctctggacacgaagcaaaagttacttctttggatattgcaggagatggg
catcaaattgctactgtatcacatgaccgaaccatcaaactatggtccagcagtaccaat
gagaaggatcaggcaatggatgtagattag
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integrated database retrieval system
