KEGG   Prunus dulcis (almond): 117633801
Entry
117633801         CDS       T07328                                 
Name
(RefSeq) coatomer subunit beta'-1-like
  KO
K17302  coatomer subunit beta'
Organism
pdul  Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pdul04131]
    117633801
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pdul04147]
    117633801
Membrane trafficking [BR:pdul04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    117633801
Exosome [BR:pdul04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   117633801
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_HPS5 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N PEP5_VPS11_N WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_SPT8 WD40_RFWD3 TPR_GEMI5 Beta-prop_DCAF12 WD40_like
Other DBs
NCBI-GeneID: 117633801
NCBI-ProteinID: XP_034223473
LinkDB
Position
7:complement(19056718..19065608)
AA seq 905 aa
MPLRLDIKRKFVQRTERVKSLDLHPTEPWILASLYSGTVFIFNYQSQSMAKSFEVSELPV
RSAKFVARKQWVVAAADDMFIRAYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHCHYVMQVTFNPKDTNTFASASLDHTVKIWNLASPDPNFT
LDAHVKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKTCVQTLEGHTHNVSAVCFHPE
LPVIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAFGYMKGSRRIVIGYDEGAIMVKIG
REVPVASMDSSGKIIWAKHNEIQTVNIKSVGADFEVADGERLPLAVKELGTCDLYPQSLQ
HNPNGRFVVVCGDGEYIIYTGLAWRNRSFGSALEFVWSSDGEYAVRESTSRIKIFSKAFQ
EKKNVRPTFSVEHIYGGVLLAMRSNDFVCFYDWVECRLIRRIDVNVKNVYWADSGDLVAI
SSDSSFYVLKYNRDIVSSYFDSGRPVDELGVEDAFELLFEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSCLYLIDKEFNVMGYTLLLSLIEYKTLII
RGDLERAKQIFPTIPPEQHNSVARFLESRGMLEDALVVATDADYKFDLAIQLGRLEIAME
IAKEAQSESKWKRLGELAMSTGKLEMAEDCLSHGKDFSGLLLLYSSLGDAQGILKLTSLA
KEQGKNNVAFLCLFMLGKVEECIQLLLESERIPEAALMARSYLPSKVSEIVSIWRNDLNK
VNKRAAESLADPQEYPNLFEDWQVSLALESKSAENSGIHPPAEQYPIYAEKSTTSLVERF
RSMQIDEEAPFENGDLDQEEVQENGENQDEGETVEEEDDSTNGVVLVNGDQGEELGVNDE
RTASP
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgcctctcaggcttgatatcaagagaaaatttgtgcaaagaaccgagagagttaagtct
ttggatctgcatccaactgaaccatggatccttgcaagtctgtattcaggaaccgtgttt
attttcaattaccagtcacagagcatggcaaagtcttttgaagtctctgaattgccagtt
cggtcagcaaaatttgtagcgcgtaagcagtgggtagtagctgcagctgatgacatgttc
atacgtgcatacaattataatacgatggataaggttaaagtgtttgaagcacactcagac
tatattagatgtgtggctgtccatccaacacttccatatgttttgtcatcatccgatgac
atgcttatcaaactgtgggattgggaaaaaggttggatgtgtactcagatattcgaaggg
cattgccactatgtgatgcaagtgacctttaatcctaaagacaccaatacttttgcaagt
gcttccctggatcacactgtaaagatctggaatcttgcctcccctgaccccaattttacg
ttggatgcccacgtgaaaggggtaaattgcgttgattacttcactggcggtgataaacct
tacttaatcacaggctcggacgatcatactgcaaaggtgtgggactatcagacaaaaact
tgtgttcagacacttgaagggcatactcacaatgtctctgcagtatgttttcatccggaa
cttccagttataattactggttctgaggatggaactgttagaatatggcactcaacgact
tatcggcttgaaaacacactgaattatgggcttgaacgtgtttgggcctttgggtatatg
aaaggttcacgtcggattgtaattggttatgatgaaggagccataatggtaaaaattggc
cgagaagtaccagttgctagcatggatagtagtgggaaaattatttgggctaagcataat
gaaattcaaactgtgaatatcaagagcgttggagcagattttgaggttgcagatggagaa
agattgcctttggccgtgaaggagttgggaacctgtgacctttatcctcaaagtttgcag
cacaacccgaatggaaggtttgttgttgtttgtggagatggtgagtacataatatacaca
ggtctagcatggagaaatagatcctttggctcagcattggaatttgtctggtcatctgat
ggagaatatgctgttagggaatctacttcaaggataaaaattttcagcaaagcattccag
gaaaagaagaatgttcgaccaacattttctgtagaacacatttatggaggggtcttactg
gcaatgcgctcaaatgactttgtatgcttctatgactgggtggaatgcagattgattaga
cgaattgatgtcaatgtcaagaatgtttattgggctgatagcggtgatttggttgcaatt
tctagtgattcatcattttacgttctaaaatacaatagggatatagtctcatcgtatttt
gacagtggaaggcctgttgatgaactaggtgttgaggatgcctttgagctcctctttgaa
ataaacgagcgtgtcagaactggattatgggttggggactgtttcatttacaataactca
tcttggcgactaaattattgtgttggtggtgaggtgaccacaatgtttcacctagaccgg
cccatgtacttgttgggctatcttgccaatcagagttgtctttatctaattgataaagag
tttaatgtcatgggatacaccttgcttctcagcttgatcgagtacaaaacacttattata
cgcggagatttagagcgtgcaaaacaaatttttccaacaatacctccagagcaacataat
agtgtggctcgttttttggaatctcgaggtatgttggaggatgcactggtggtggctaca
gatgctgactacaaatttgatcttgctatacagctgggtagacttgagattgcaatggaa
attgctaaagaagcgcaaagtgaatccaagtggaagcggctgggagaattagctatgtcc
actgggaagcttgaaatggctgaagattgtctatcacatggaaaggacttttctggcttg
ttgcttctttattcttctcttggagatgctcaaggaatattaaaactcacatcccttgcc
aaagagcaaggaaagaataatgttgctttcctttgcttatttatgctgggtaaagtggaa
gaatgcatccagctgttgctggaaagtgaacggatacctgaagcagctttgatggcacga
tcttacctcccaagcaaggtctcagagatagtttcaatttggagaaatgacctgaacaag
gtcaataaaagagctgcagaatcattggcggatccgcaagagtatcctaatttgtttgag
gactggcaagtttctcttgcccttgagtctaaaagtgcagaaaatagcggcattcatcct
cctgctgaacaatacccaatttatgctgagaagtcaacgactagtcttgttgaaaggttc
agaagcatgcaaattgatgaagaagccccatttgaaaatggagatctggatcaagaggag
gtccaggagaatggagaaaatcaagatgaaggtgagactgttgaggaggaagatgattca
acgaatggtgttgttcttgtaaatggcgaccagggtgaagagttgggtgtaaatgatgag
agaacagcatcaccataa

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