Prunus dulcis (almond): 117633844
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Entry
117633844 CDS
T07328
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117633844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdul04121
]
117633844
Enzymes [BR:
pdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117633844
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117633844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
Beta-prop_NOL10_N
FAIM1
Motif
Other DBs
NCBI-GeneID:
117633844
NCBI-ProteinID:
XP_034223546
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All DBs
Position
7:10440898..10445710
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AA seq
285 aa
AA seq
DB search
MAMAKLETGSMLNKTSPGLGGKNGLYSTNGVHELLECPVCTNLMYPPIHQCPNGHTLCSD
CKIRVHNCCPTCRYELGDIRCLALEKVAESLELPCRYQSLGCHDIFPYYSKLKHEQHCRF
RLYNCPYAGSECSVTGDIPTLVGHLKEDHKVDMHDGCTFNHRYVKANPNEVENATWMLTV
FNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDDIEAKKFSYSLEVGANGRKLIWQGIPRS
IRDSHRKVRDSQDGLIIQRNLALYFSGGDKQELKLRITGRIWKEE
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggcaaagttggagacaggtagtatgctcaataaaacttccccaggtttgggt
ggaaaaaatggtctttattcaaccaatggcgtgcatgagttacttgagtgccctgtctgc
acaaatttgatgtaccctcctattcatcagtgtccaaatggtcacacattatgttcagac
tgcaagattagggtgcacaattgttgtcccacttgccgctatgaacttggagatataagg
tgtttggccttggagaaagttgctgaatcattggaacttccgtgcagataccagagttta
ggctgtcatgatatatttccatactacagcaagctcaaacatgagcaacactgtcggttt
cgtctatacaattgcccttatgctggatctgagtgctctgttacgggtgatatccctact
cttgttgggcatcttaaggaggatcacaaggttgacatgcatgatgggtgtaccttcaac
catagatatgttaaagcaaacccaaatgaagttgaaaatgcaacttggatgctaactgtc
tttaattgttttggaagacagttctgtttgcactttgaagccttccagctaggcatggct
ccagtctacatggcctttttacgattcatgggtgatgacattgaggctaagaaattcagc
tacagtttggaagttggcgcaaatggccgtaagctgatatggcagggaattcctaggagt
atccgggacagtcatagaaaagttcgtgacagccaagatggactcattattcagaggaat
ctagctctgtatttctctggtggggataagcaagaactaaagttgaggattactggccgt
atatggaaagaagaatga
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