Prunus dulcis (almond): 117634223
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Entry
117634223 CDS
T07328
Name
(RefSeq) polyadenylate-binding protein 7 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03015
mRNA surveillance pathway
pdul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117634223
09123 Folding, sorting and degradation
03018 RNA degradation
117634223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117634223
03041 Spliceosome [BR:
pdul03041
]
117634223
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117634223
mRNA cycle factors
Stress granule specific factors
117634223
Spliceosome [BR:
pdul03041
]
Complex C
Other components
Complex C specific factors
117634223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RBD_DEAH11
Nup35_RRM_2
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
117634223
NCBI-ProteinID:
XP_034224093
LinkDB
All DBs
Position
7:complement(13345651..13349979)
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AA seq
637 aa
AA seq
DB search
MAVNPLAVGVPTASLYVGDLNPYITDGQLYDTFSQFKSITSVRVCRDSTDGHSLCYGYIN
FINQQEAIRAIEVKNNSEVHGKVIRVMWSHRDPDARRSGIGNVFVKNLSESIDNVGLQDM
FKKFGNILSCKVATFDDGKSKGYGFVQFESEESAIAAIEKLNGSTVGDKPLYVAKFIRKS
DRVLANPDMKYTNLYVKNLDTNVREEIVEEKFSEFGKIVSFTITKDDNGNSRGFGFVNFE
NPDDARRAMEAMNGSQLGSKVLYVARAQKKAEREQMLRRQFEEKRKEQMVKFKGSNVYVK
NIDDDVTDEELVEHFSQCGTITSAKIMRDEKGISKGFGFVCFSTPEEGNKAVNTFHGYMF
HRKPLYVAIAQRKEERQAQLQLQYAQRMAGLAGPSTAVIPGGYPPIYYQAPSGVVPQVPP
RPGLMYQPLGLRPGWRANGFAPTSGPPYQPPPVSVMPRQHRQNRGRMNGHMLPQGSAYMP
HLQQSTQLSHSAKDSNNQQRTGQAKYVPNGRQRDMNKGSGVSTNASNSVGGGSQGPEMLS
SMLAAASPEQQKQILGEHLYPLVHKHKHFHLQPDLASKITGMLLEMDNSELLLLLESPES
LAAKVGEAVQVLKISKTKVSNKDAIHPSFLSAEVAVN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggccgttaatcctctggcggtgggtgtgccgactgcgtcgctgtacgtcggagacctt
aatccgtacatcaccgatggtcagctgtacgatactttcagtcagttcaagtccatcaca
tccgtacgggtctgtagggactccaccgacggccattctctctgctacggctacatcaac
ttcatcaaccagcaagaagcaattcgagctattgaggtgaagaataactctgaggtgcat
ggaaaggtgataagggtcatgtggtcgcatcgtgatcctgatgcgagaagaagtggaatt
gggaatgtgtttgtcaagaacttgagcgaatcgattgataatgtagggcttcaagatatg
tttaagaaatttggaaatatattgtcttgcaaagtcgccacgtttgatgatgggaagagt
aaaggctatggctttgttcagtttgagtctgaggaatctgcaattgctgctattgagaag
ctaaatggctccactgtgggagacaaacctttgtatgttgccaaatttattagaaagagt
gatcgagttttggccaatcctgatatgaaatatacaaatttgtatgtgaagaatttggat
acaaatgtcagggaagagattgtggaggaaaagttctccgagtttgggaaaattgttagc
ttcactattacaaaggatgacaatgggaactctagaggttttgggtttgtgaactttgag
aacccagatgatgctcgaagagcaatggaggcaatgaatggatcacaactgggctccaag
gttctgtatgtagcaagggcacagaagaaggcagagcgtgagcaaatgttgcgtcggcaa
tttgaggagaaacgaaaggagcaaatggtgaaattcaagggatcaaatgtgtatgtgaag
aacattgatgatgatgtcactgatgaagagctggtagaacacttcagtcagtgtggcaca
attacttctgcaaagattatgcgagatgagaaaggaataagcaaagggtttggttttgtt
tgcttctctacccccgaggagggcaataaggctgtgaatacttttcatggatatatgttt
catcggaagccattgtatgtggctattgctcagaggaaagaggaaagacaagcacagctg
cagcttcaatatgcacagcgtatggcaggacttgctggtccttcaacagcagtcatccct
ggtggataccctcctatctattatcaagctccctctggtgttgttccacaagtacctcct
cgtccgggactgatgtatcagcctttgggattgaggccaggatggagagccaacggcttt
gcacctacgtctggaccgccctatcaaccaccaccggtttctgttatgccaagacaacat
aggcaaaacaggggaagaatgaacggacatatgcttcctcagggaagtgcatatatgcca
catttacaacagtccactcagctgtcacactcagcaaaagattcaaacaatcagcagcgg
acggggcaggctaagtatgttcctaatggtcgccaacgcgacatgaataaaggatcagga
gtctcaaccaatgcttccaattctgttggaggtgggtctcaaggaccagagatgctgagt
agcatgcttgctgctgcttctcctgagcagcagaaacagatacttggcgagcatctctac
ccactcgtccataaacataagcattttcacttgcagcccgaccttgcctcaaaaattaca
gggatgctgctggagatggacaactcagaactgctgcttttattggagtcaccagagtct
ttggctgccaaagtgggagaagctgttcaggtgctcaagatctccaagactaaagtgtct
aacaaagatgccattcatcctagttttctctctgctgaggttgcggtcaactga
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