Prunus dulcis (almond): 117634270
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Entry
117634270 CDS
T07328
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117634270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117634270
Spliceosome [BR:
pdul03041
]
Common components
Common spliceosomal components
SR proteins
117634270
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
117634270
NCBI-ProteinID:
XP_034224181
LinkDB
All DBs
Position
7:complement(10608395..10613531)
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AA seq
341 aa
AA seq
DB search
MVHIIVGSSRCNLVFFCTFFLFWGINSPKVFGFGLILSPKSKNPITKTPKKGQTPLHPWI
YLQSGNRNHSSGRARTMSHFGRSGPPDIADTYSLLVLNITFRTSADDLFPLFDKYGKVVD
IFIPRDRRTGESRGFAFVRYKYADEAQKAVERLDGKVVDGREITVQFAKYGPNAERIQKG
RITEALPKSRYRSRSRSPRRRYRDDYRDRDYRRRSRSRSWDRSDRDRYHGRDREYRRRSR
SCSASPDYYRSRRRVRYDDERRSRSRSRSPIRSRSIDSVSPARCSPSPHKSPSPLIRSRS
ATPARRSHDGHSPTSRSVSPRHRLADSRTPSPRNSDADLCS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggttcatattattgtgggatcgagtcggtgtaatttggttttcttttgtacctttttt
cttttttggggtatcaatagcccaaaggtttttgggtttgggttgattttgagccctaaa
tccaaaaatccaatcaccaaaacccccaaaaagggccagactcctcttcatccctggata
tatttgcagtcggggaaccgcaaccattcttcaggaagagcaagaaccatgtctcacttt
ggtaggtctggccctcctgacatcgctgacacttactctctcctagtcctcaacataacc
ttccgtacgagcgctgatgatctgtttccgcttttcgataagtatggcaaagttgtcgac
attttcatccccagagaccgaaggactggcgagtctaggggttttgcttttgtgcgatac
aaatatgctgatgaagcacagaaagcggttgaaaggctcgatggaaaagttgttgatggt
cgagagataactgttcagtttgcaaaatatgggccaaatgcggagaggattcagaaagga
aggattactgaagctctaccaaaatcaaggtacaggtcaagaagtcgcagtcctcggaga
aggtaccgggatgactacagagaccgtgactacaggaggagaagtcgcagtaggagttgg
gataggtctgaccgtgacagataccatggtagggacagagaatatcgtcgacgaagcagg
agctgcagtgccagccctgattactataggagcaggaggagagttcgctatgatgatgaa
aggcggagtcgaagtcgaagtaggagtccaattcgaagtcgttccattgatagtgtctcc
cctgctcggtgtagccctagtcctcataagagtccttccccactaatcaggagccgtagt
gccacccctgctagacgtagtcatgatggacattcccctacttctcgaagtgtttcacca
cgccatcgtcttgctgattctcgtaccccatcccctcgaaattcagatgctgatttatgt
tcgtga
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