Prunus dulcis (almond): 117634280
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Entry
117634280 CDS
T07328
Name
(RefSeq) LOW QUALITY PROTEIN: RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117634280
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
90S particles
Other 90S particles
117634280
Pre-60S particles
Other pre-60S particles
117634280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
Hemerythrin
HEAT_ECM29
HEAT_GCN1_C
Motif
Other DBs
NCBI-GeneID:
117634280
NCBI-ProteinID:
XP_034224204
LinkDB
All DBs
Position
7:complement(16807961..16815540)
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AA seq
1280 aa
AA seq
DB search
MNPSYIPPEFIEARVFLQLPNMENIEMDDAYTLYLSEDDDYICTSILARFSNSTRDEHHH
LWAAISAMSQELKDKHIPSTPVAYLGFTCSSLDGLSSQSEPPAHVIDALLTILSIVFQKV
SAAILMNKSEFLSELLVRVLRSSSLTVGVAVSGLKCISHLLIIRGRVNWSDVSSLYGLLL
SFITDSCPKVRRQSHLCLRDVLQSFQGTTLLAPASEVVSNLFERFLLLAGGSNPDAGEGP
KEAQEVLYVLDALKECLFLMSINYKTAVLKYYKTLLELHQPLVTKRITDSLNILCLNPTT
DVSPEVLLDLLCSLALSVSTNETSADGMTFTACLLGTGMAKVYSLNRQICVVKLPTVFNA
LRDVLASKHEEAIHAATDTFKSLIHVCIDESLIKQGVDQIVTNANMDTRKSGQTIIAEVC
ASIESLLRYDYNGVWDLAFHIVSAMFDKLGVYSSYFMRGTLKSLADMENLPDEDFPFRKQ
LHECLGSALVAMGPETFLGLIPLNLEAENLSQVNVWLFPILKQYTIGARLSFFTXSILGM
ARTIKEKSRKLESQGRTFSSRSTDALVHALWSLLPSFCNYASDTAESFKDLEQALCSALK
DEPEIRGIICLSLQILIQQNKKTVEEVNDLADSEVGSARHRALANYSPQVTADNLSVLKS
PACKLLDVLSDVFLNTTKDDAGCFQSIIGEFVSISDEEAVSKCFKHKRTELLNVKAKDST
DSNSNRAQLFDLAVSFLPGLNAEEVDLLFGRIKLALQDDERLIQKKAYKVLSIILRDCDR
FLSSKLDELLDLIEVLPSCHFSAKQHRLDCLYLLVVHLSKSDAEQRRHVILSFLAEIILA
LTEAHNKTRNRAYDILVQIGHAYGDEEKGGKREDLLEFFYMVAGGLAGETPHMISAAMKG
LARLAYEFCDLVSTPSNLVPSIFLLLQRKNKEIIKATLGFLKVLVAKSQTEGLHLHLESM
VESLLKLQDATKTHFKAKVKFLLEMLVRKCGLDAVKAVMPEEHMKLLTNIRKIKERKEWK
LGSKSEEARSQVSRATTSRLSRWNHTKIFSDFDDEETEDSDTDYMDAKTVSGKRRKASLQ
LKSKASSLRRRTNKYLLDQLEEEPLDLLDRQRTRSVLLSSENLNQKMESDDEPEIDDDGR
LIICDEAESYKKKPSKPHSDARSEAGGSYLPVDSKKTHKRRKTSESRWAATGKEYVSKKA
GGDLKRKDKLEPYAYWPLDRKMMSRRPEHRATARKGISSVVKMTKKLEGKSVSTIFFTKG
SRFKNKSRVQKKGGGKKKTR
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctagctatatacctcctgagttcattgaagctagggtttttctgcaactcccc
aacatggaaaacatcgaaatggacgacgcctacactctctacctaagcgaagacgacgac
tacatctgcacctcaatcctcgcgcgcttcagcaactccacgcgcgacgaacaccaccat
ctctgggcagcaataagcgccatgtctcaggagctcaaagacaagcacatcccttcgacc
ccggtagcctacttgggcttcacgtgctcttctcttgacggcctctcctcccagtccgag
cctcccgctcacgtgatcgacgctctcctcacaattctctccattgtctttcaaaaagtc
tcggctgcaattctcatgaacaagtccgagttcctatcggagctcttggtccgtgttctg
cggtcgtcttctttgacggtaggtgtagccgtctcagggttgaaatgtatatcgcatctg
ctcatcatcagaggccgtgtcaactggtctgatgtatcttcattgtacggcttattattg
agcttcattactgattcttgccctaaggtgagaagacaatcacatttgtgtcttcgtgat
gtactgcaaagttttcaaggaacaacgctgctcgcccctgcaagtgaagtggttagtaac
ttatttgaaaggtttcttctgcttgctggtgggtcaaatccagatgcgggtgaaggaccc
aaggaagctcaggaggtcttgtatgttttagatgctttgaaagagtgtctttttcttatg
tcaatcaactacaaaactgccgtcctcaagtactacaaaactctcttggaactgcaccaa
ccacttgttacgaagcgcataacagatagtttgaatatactttgtctcaatccaactaca
gatgtttctcctgaagtgttgctcgatctgttatgctcattagctctttctgtctccaca
aatgagacatctgccgatgggatgacatttacagcttgcttgcttggtactggaatggct
aaagtttattccctcaataggcaaatatgcgtagttaaactccccaccgtattcaatgca
ctcagagatgtattggcatctaagcatgaagaggccatacacgcagcgaccgacacattt
aagagtctcattcatgtttgcatcgatgaaagtttgatcaaacagggagttgaccagatt
gtaacgaatgcaaatatggatacaaggaagtcggggcaaactataattgctgaagtgtgt
gcttctattgaaagcttacttcgttatgattacaatggtgtctgggaccttgcatttcat
attgtttcagcaatgttcgataaattaggtgtatactcttcttatttcatgaggggtaca
ctcaaaagcttggcagatatggagaacttgcccgatgaagatttcccttttaggaaacag
ctgcatgaatgccttggatcggctcttgttgcaatgggacctgaaacctttttgggtctt
atacctcttaatttggaggctgaaaacttaagtcaggtgaatgtgtggctctttccgata
ctgaagcagtatactattggtgcacgtttgagcttctttacanngtcaattttgggtatg
gctagaacgataaaggagaaatctagaaagcttgagtcacaaggacgtactttttcatca
aggagtacagatgcacttgtacatgctttgtggtcattgttaccttcattttgcaactat
gcttccgatactgctgaaagtttcaaggatctagagcaagccctgtgcagtgcccttaaa
gatgaacctgagattcgtggaattatatgcttgagcttgcagattcttattcaacaaaat
aagaaaactgtggaagaagtgaatgatctggctgatagtgaagtaggcagtgccagacat
agagctttggctaattatagccctcaggttacagcagataacctaagcgtgctcaagtca
cctgcttgcaagttactggatgttttatcagatgtctttttgaataccacaaaagatgat
gcaggctgttttcagtccataattggcgagtttgtttcaatatcagatgaagaagctgtg
tcaaagtgtttcaaacataaaaggacagagcttttaaatgtgaaagcaaaagattctaca
gattctaattccaaccgggcacaactatttgacttggcagtttcatttttacctggttta
aatgctgaagaggttgatcttctatttgggagaataaagcttgcattacaggatgatgaa
cgtttgatacaaaagaaggcatacaaagttctttcaatcattctcagggactgtgatagg
tttctttcatcgaagctcgatgaattgcttgacttgattgaagtgttgccttcttgccat
ttttcagctaaacagcacagacttgactgcttgtacctcctagtagtccacctttcaaag
agcgacgcagagcagaggcggcatgtcatcctaagtttcctggcagaaataattctagca
cttacagaggctcacaataagacaagaaatagagcttatgatatccttgtccaaattggg
catgcttatggtgatgaagagaaaggagggaagagagaagacctgttggaatttttttac
atggtagctgggggcctagctggtgaaactcctcatatgatcagtgctgcaatgaagggc
ttagctcggttggcttatgagttttgtgatcttgtttcaaccccaagcaatttggttccg
tccatatttctcctcctccagagaaagaacaaagaaataattaaagctactttaggtttc
ttgaaggtattagtggccaaatcacaaaccgaggggttgcatttgcacttggaaagcatg
gtggaaagcttgctgaagttgcaagatgctactaaaacccacttcaaagccaaggttaag
tttcttctagaaatgctagtcaggaaatgtgggcttgatgctgttaaggctgtgatgcct
gaagaacatatgaaactgcttaccaacatacggaagatcaaggaacggaaagagtggaaa
ctaggttctaaatctgaggaagctagatctcaagtttccagagcaactacatccaggtta
agcaggtggaaccatacaaaaatattttctgattttgatgatgaagaaactgaggatagt
gatacagattacatggatgccaaaactgtctcgggcaaacgtcgcaaggcttccttgcag
ctcaaatccaaagcatcttcattacgaagaagaacaaataagtacttgcttgatcaacta
gaagaggagccacttgacttgcttgatcggcaaagaacaaggtcagtgcttttatcatcc
gagaatttaaatcaaaaaatggagtcggatgatgagccagagatagatgatgatgggcgc
ctaataatttgtgacgaagcagaatcgtacaagaaaaagccatccaaacctcattcagat
gcaagaagtgaagctggtggtagttacttgcccgtagactcaaagaaaacacacaagcgg
aggaagacatcagagtccaggtgggctgccaccggcaaagagtacgtgagcaagaaggct
ggtggggatttgaagaggaaggacaagcttgaaccgtatgcatattggccacttgatcga
aaaatgatgagccgtaggccggagcatagggcaactgcaagaaaagggatatcaagtgtt
gtgaagatgacaaagaagcttgaagggaagagtgtttcaactattttcttcactaaaggc
tcaaggtttaagaataaaagtagggttcagaagaaaggaggtggcaagaagaaaactagg
tga
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