Prunus dulcis (almond): 117634552 Help Entry 117634552         CDS       T07328                                  Name (RefSeq) vacuolar sorting protein 39   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism pdul  Prunus dulcis (almond) Pathway pdul04148   Efferocytosis Brite KEGG Orthology (KO) [BR:pdul00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     117634552  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pdul04131]     117634552 Membrane trafficking [BR:pdul04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     117634552 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H AlaDh_PNT_N TPR_19 zf-HC5HC2H_2 DUF2247 DUF2175 Motif Other DBs NCBI-GeneID:  117634552 NCBI-ProteinID:  XP_034224598 LinkDB All DBs Position 7:15240655..15246137 Genome browser AA seq 1009 aa AA seqDB search MVHSAYDSFELISDCPTKIEAIESYGPKLLLGCSDGSLKIYAPDSSSSGRSPPSDYHAHK LHQEPYALERNLSGFSKKPLVSMEVLESRELLLSLSESIAFHGLPNLGTIAVITKAKGAN VYSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDVVKSMSWCGENICIGIRREY MILNSTNGALSEVFPSGRLAPPLVVSLPSGELLLGKDNIGVFVDQNGKLLQEGRVCWSEA PNVVVIQKPYAIALLPRYVEVRSLRAPYPLIQTVVLRNARRILQSNNSVIVALENAVYGL FPVPLGAQIVQLTASGDFEEALALCKLLPPEEASLRAAKEGSIHMRYAHHLFDNGAYEDA MEHFFASQVDITYVLSLYPSIVLPKTTMVLEPEKLMDISGDSSYLSRGSSGISDDMEPST PLHLLESEESAALESKKMSHNTLMALIKFLQKKRYGIIEKATAEGTDEVVLDAVGNNFAS FESNNRFKKSNKGRGSIPVTSGAREMAAILDTALPQALLLTGQASAALELLKGPNYCDVK ICEEILQKNNHHAALLELYRCNSMHHEALKLLHQLVEDPKSNQVQTELIQKLKPESIVEY LKPLCGTDPMLVLEYSMLVLESCPTQTIELFLNGNIPADLVNSYLKQHAPNMQATYLELM LAMDENGISGNLQNEMVHIYLSEVLDWHADLSAQQKWDEQTYSSTRKKLLSALESISGYN PEALLRRLPTDALYEERAILLGKMNQHELALSLYVHKLHVPELALSYCDRVYESLVHQQS SRSSGNIYLTLLQIYLNPRRTTKNFEKRITNLVSPQNIGTPKVGSASTVKSKGGRGNKKI AAIEVADEIRVGQSSTDSSRSDGDADESSEEGGSTIMLDEVLDLLSRKWDRINGAQALKL LPRETKLQNLLPFMGPLLRKSSEAYRNLSVIKSLRQSENLQVKDELYEQRKGVVKITSDS MCSLCRKKIGTSVFAVYPNGKTIVHFVCFRDSQSMKTVGRGSPSPLRKL NT seq 3030 nt NT seq  +upstreamnt  +downstreamnt atggtacacagtgcctacgattcattcgagctcatcagcgactgccctacgaagatcgaa gccatcgaatcgtacggtccgaagctcctcctcggctgctctgatggatctctcaaaatc tacgctccggactcctccagttccggccgttctccgccgtccgattaccacgcgcacaag ctgcatcaggaaccgtacgcactggagagaaacttgtccggtttttcgaagaagcctttg gtctccatggaggtcctggaatcaagggagctccttctatcgctgtctgagtcaatagcg tttcatggcctcccgaacttgggcaccatcgcggtgatcacaaaggcgaagggcgccaat gtctactcctgggatgaccgcagaggcttcttgtgcttcgcgaggcagaagcgggtctgc attttcagacatgacggaggacgagggtttgtggaagtgaaagagtttggggttccagac gtggtgaagtcgatgtcgtggtgcggtgaaaatatatgtatagggattagaagagaatac atgatactgaattctactaatggtgcattgtctgaggtgtttccttcggggagattggca ccgccattggtggtctctcttccttctggggagcttcttcttggaaaggataacattggg gtttttgtggaccaaaatgggaagcttcttcaagaaggcagggtttgttggtcagaggct cctaatgttgttgttattcagaagccatatgcaatagctctcttaccgagatatgttgag gttcgatcacttcgagctccatacccattgatacagactgtagttcttcggaatgctcgt cgtattctccagagcaacaattctgtaattgttgcattagagaatgctgtttatggtctc ttccctgttcctcttggtgctcagattgtgcaattaacagcatctggcgattttgaggaa gcgttggcattgtgcaagctgcttccgccagaagaagcaagtcttagagctgcaaaggag gggtcaattcacatgagatatgctcatcatctttttgataatggggcctatgaggacgcc atggagcatttttttgcatctcaagtagatataacctatgtactttctttgtatccatct attgttcttcctaagacaactatggttttggagccagagaagctgatggatatttctggg gattcctcatatctctcaagaggttcatctggtatatcagatgatatggaaccctctacc cctttgcatctactggaatctgaagagagtgcagcattagagtccaagaaaatgagccat aacactctcatggctctgataaagttcttacagaaaaaaagatatggcataattgaaaag gctactgctgaggggacagatgaggttgttttagatgcagtaggaaacaactttgcatcc tttgagtctaataataggtttaagaaatcgaacaaggggcggggcagcatcccagttacc tctggtgctagggagatggctgcgatactggatacagcactaccccaagctctacttctt actggacaggcttcagcggctttagaattactgaaaggtcctaactactgtgatgtaaaa atatgcgaggagattctccagaaaaacaatcaccacgctgccttgttagaactctacagg tgcaattcaatgcaccatgaagctctaaaacttttgcatcaattagtagaagacccaaaa tctaaccaagtgcaaactgaattgatccagaagttaaagcctgagtcaattgttgaatat ctcaagcctctctgtgggactgatcccatgcttgtcctggagtattcaatgcttgttctg gaaagttgtccaacacagacaattgagctctttttgaatggaaatattccagcagacctg gtgaactcttatttgaagcagcatgctcccaacatgcaggccacatacttggagcttatg cttgcaatggatgaaaatgggatctctggaaatctgcaaaatgaaatggtacatatctat ctatcagaagttcttgattggcatgctgatttaagtgctcagcagaaatgggatgagcaa acttactcctcaacgagaaaaaaattattgtctgctttagagagtatttcaggatataac ccagaggctttgttgagacgtcttccaacagatgctttatatgaagagcgtgcaattttg ttgggaaaaatgaaccaacatgagcttgccttatctctatatgttcataagcttcatgtt cctgagctggcactgtcctattgtgatcgagtgtatgagtcattggttcatcagcaatct tcaagatcttctggcaatatatacctcactctattgcaaatttatcttaatccgaggaga acaaccaagaactttgagaagcgaattacaaatttagtatcacctcagaatatcggtaca ccaaaggttggttctgcaagtacagttaaaagtaaaggaggtcgtggaaataagaaaatt gctgcaatagaggtggcagatgaaataagagtcggtcaaagtagcactgacagtagcagg agtgatggagatgcagacgaatctagtgaggaaggaggttcaacaatcatgcttgatgag gtcctggatttgttaagccgaaagtgggacagaataaatggagctcaggccctcaaactt ttgccaagggaaactaagctacagaatttgcttccatttatgggaccgctgttgagaaaa tccagtgaagcatacaggaacctttcagtgatcaagagtttgagacaaagtgagaaccta caggttaaggatgaactctatgaacaaaggaaaggggtggtgaagatcaccagtgatagc atgtgctccctttgcaggaagaaaataggaacaagtgtctttgcagtgtatccgaacgga aaaacaatagtacattttgtctgcttcagagactcacaaagcatgaaaactgtgggcaga ggatcgccttcgccgctaaggaagctatga

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