Prunus dulcis (almond): 117634802
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Entry
117634802 CDS
T07328
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117634802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117634802
Enzymes [BR:
pdul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
117634802
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
90S particles
Other 90S particles
117634802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
SPATS2-like
Motif
Other DBs
NCBI-GeneID:
117634802
NCBI-ProteinID:
XP_034224918
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All DBs
Position
7:complement(6297696..6301667)
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AA seq
290 aa
AA seq
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MVRPYAVKGKKRRKREDKYERVEEAEEASEPEETEASQPEDVNKGAMVEKQSNGNEGEEK
VGNSIELEGIPITPVELSTKNGPGAIFILERASLEVAKVGKTYQLLNSDDHSNFLRKNNR
DPALYRPDIVHQALLMVLDSPINKAGKLRNVYVRTAAGVLIEIKPHVRIPRTFKRFCGVM
LQLLQKLSISAVGKREKLMRVIKNPVTQYLPVNSRKIGFSYSSEKLVSIHNYVAAAENNR
DFVFVVGAMAHGKVETDYTDDFISISGYPLSAAFCISMICQALAGKWDIL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggccatatgcagtgaagggaaagaagcgaaggaagagggaagataaatatgaa
agagtagaagaagcagaagaagcgtcagaaccagaagaaacagaggcttcacagccagag
gacgttaacaagggagctatggttgagaaacagagtaatggaaacgaaggagaagaaaaa
gtgggtaactcaattgaacttgagggtattccaataaccccagtagaacttagcaccaag
aacggacctggggccatcttcatccttgagagagcttctttggaagttgccaaagttgga
aagacttatcagctattgaattctgatgatcactcaaatttcttgcggaagaacaacaga
gatcctgctctttacaggcccgatattgttcatcaggctctacttatggttttggatagc
ccaattaataaggctgggaagttgcgaaatgtgtacgtgagaactgcagcaggtgttctt
attgaaattaagccacatgttcgtatcccaaggacatttaagcggttctgtggtgtcatg
ttgcaactgctacaaaaactgagtatttctgctgttggtaagcgtgagaaacttatgcgt
gtgataaagaaccctgtgacacagtatttacctgtcaactctcgcaaaataggcttctcg
tacagttcggaaaaattagttagcatacacaattatgttgctgctgctgaaaacaataga
gactttgtttttgtggttggtgcgatggctcatggaaaagtggagacagactatactgat
gattttatatcaatctctggttatcccttgagtgctgcattttgtatttcgatgatttgc
caagcattggcgggaaagtgggatattttgtga
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