Prunus dulcis (almond): 117634823
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Entry
117634823 CDS
T07328
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117634823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117634823
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117634823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DUF6300
Motif
Other DBs
NCBI-GeneID:
117634823
NCBI-ProteinID:
XP_034224959
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Position
7:complement(16629446..16637630)
Genome browser
AA seq
1237 aa
AA seq
DB search
MMRGVKPLPEAARSWMRSGVILYDLTSVVEELVFNSLDAGATKVSVFVGVGTCYVKVVDD
GFGITRDGLVLVGERYATSKFDHSPGTDSASGSFGFRGEALASISDVSLLEILTKASGRP
NGYRKVMKGCKCLYLGIDDDRKDVGTTVVVRDLFYNQPVRRKYMQSSPKKVLHAVIKCVH
RIALVHSKVSFKLIDIESEDELLRTISSPSPVALLKRTVGIEVSPALHELNISDGEIELS
GYISSPCNSLAFKAFQYVYINSRFICKGPIHKLLNQLASNSECWDPGKDVDVSQNRKRSR
PQSLPAYFLNLSCPRSFYDLTFEPSKTYVEFKDWVPVLTFIDKAIQNFWKEKITDGESGC
HGADMVGEDQMWKKDLLDGDLSELSKFGKKRSRLQNFQASPDLMEMLIKEDNHTSQKRHV
RTSYGYLHENTEDFDDFQKQHIEIESGHHTDYSFQSRDDHLAKVMLTATPKKEKHPSMPD
INFFPEEDYIMEYRSAAAEGSSNVDDNIFSSSWQDEPFKVDPSVGNGSTGSGVSCGLNEF
GTDVEFTQDLVQPFLRSCSSKGRFPSERDLCTDGGLKFHYDGFRNKRRRGGFYNSVESPE
IYGSKSCDFVSRTLWPEEESSVQPFPSVITKFDLYTEFDSPSRDFIKSIPRYGEHFGGEN
SFMNAENIVSCHKTLINDLCSVTSNSLSQSTYLDFEPFSNINAVEGHYRSVKRDTNKYFV
DGEEKDCTFSYDIISKSSSREHCNTHTDRELEFNDYAGSRKFFQPHNLDGEFSPECPDIL
ADETDWSRQYSHCNDNMGFDMYKRQKDQFEDQDCLKNHVSIGRSKRSHSAPPFNRCKRRY
FTLSHPLTTTAGKLDAQNFHNAATYPEASKMKDVHQPPDGCHLNLKLSAVEDISADDRYQ
ESQDFKAGVNKHEVEMFEQSKCSGIQATAPIKEFISTDQDSLNCGTKWRNCCPQIMNASK
MQGLHDQNSILDISSGFLHLAADSLVPESITKNCLSDCRVLQQVDKKYIAVMAGRTFAII
DQHAADERIRLEELRQKVLSGEAKTITFLDVEQELVLPEIGYQLLHNYAKPVEEWGWLCN
IQAEGSGSFKRNLNLLHRQPTAITLIAVPCILGVNLSDSDLMEFLQQLADTDGSSTMPPS
VLRILNSKACRGAIMFGDSLLHSECSLIVEELKQTSLCFQCAHGRPTAAPLVNLEALHKH
IAKMASLSDGEDQLWHGLRRHELSLERAEKRLSLSKS
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggggcgtgaagcccttgcctgaggcagctcgtagttggatgcgctccggagtt
atcctgtatgacttgacgagcgttgtggaggagttggtcttcaatagtttggatgctggc
gcaacaaaggtatcggttttcgtaggcgttgggacatgctatgtgaaagtagtggatgat
ggatttgggattacgcgtgatggattggtgttggtcggagaaagatatgcgacatcaaag
tttgatcattctcctgggacggattctgcaagtgggagctttggttttcgaggagaagca
ttggcttccatttctgacgtgtcattgttagaaatcttaacaaaagcttctgggaggcca
aatgggtatcgcaaagtcatgaagggatgcaaatgtttgtatcttggaatagatgatgat
aggaaggatgtgggcactacagttgttgttcgtgatttgttttacaatcaaccagttagg
aggaagtacatgcaatccagccccaagaaggtattgcatgctgtcatcaaatgtgtgcat
cggattgcccttgtgcactcaaaggtttctttcaaactcatcgacattgaaagtgaggat
gagcttcttcgtacaatttcttctccctctcccgtggcactattgaaaaggactgttggg
attgaggtctcccctgctcttcatgaattgaacataagtgatggtgaaatagagctttct
ggatacatatctagtccttgcaatagtctcgcctttaaggccttccaatatgtctatatt
aactcgaggttcatttgcaaagggccaattcataaattgcttaatcaattggccagtaat
tctgaatgctgggatccggggaaggacgttgatgtgtcccaaaacaggaaacgaagtagg
cctcagtcactcccagcttattttttgaatttaagctgtccccgatcattctatgattta
acctttgagccatcaaaaacatatgttgaattcaaggattgggttcctgtactcaccttt
attgataaggccatccagaacttctggaaggaaaagataactgatggagaatctggttgt
catggagctgatatggttggagaagatcaaatgtggaagaaagatttacttgatggagat
ttgtcagaactctctaaatttggtaaaaagaggagcaggttacaaaattttcaggcttct
cctgaccttatggagatgttaattaaagaggacaaccatacatctcagaagagacatgtc
agaacgtcatatggatacttgcatgaaaataccgaggactttgacgacttccagaagcaa
catattgagattgaatctggtcatcataccgactattcttttcaatcacgggatgatcat
ctagccaaggtcatgctcacagcaactccgaagaaggaaaagcatccttcaatgcctgat
atcaattttttccctgaggaagattatatcatggagtataggtccgcagctgcagaagga
tccagtaatgtggatgacaatatctttagctcatcatggcaagatgagccctttaaagtg
gatcccagtgttggcaatggttcaacaggtagtggagtatcttgtggccttaatgaattt
ggaaccgatgtagagttcacccaggatttagtacagccgttcctcaggagttgctcctca
aaaggaaggtttccatctgagagggatttgtgtactgatggtgggttaaaatttcattat
gatggctttagaaacaagagaaggcgcggtggcttttacaacagtgtagaaagtccagaa
atttatggcagcaagagttgtgatttcgtttcaaggaccttgtggccagaggaggaatca
agtgttcagccgtttcccagtgttataacaaaatttgacctgtatacagagtttgattct
ccgtcaagagattttataaagtcaattccacgctatggggagcattttggtggagaaaat
tcattcatgaatgcagagaacattgtttcctgccataagactttaattaatgatttgtgc
tcagtgacctccaattccttatcccaaagcacttatttggattttgaacctttctctaat
ataaatgcagttgaagggcattatagatctgttaaaagggatactaataaatattttgtg
gacggtgaagaaaaggactgcacatttagttatgatataatatcaaagagctccagtcga
gaacactgcaatacacatacggaccgtgaactagagtttaatgattatgctggttcgaga
aaattctttcaaccacacaatttagatggtgagttttctcctgaatgcccagatatatta
gctgatgagacagattggtcacgtcagtattcgcactgcaacgataacatgggttttgac
atgtataaaagacaaaaagatcagtttgaagatcaagattgtttaaagaatcatgtttca
ataggaagatcaaaaagaagccattcggcaccaccatttaacagatgcaagaggaggtac
tttactttaagtcaccctttgacaacaacagcaggaaaacttgatgcacaaaacttccat
aatgcggctacttatccagaagctagcaagatgaaggatgtccatcaacctcctgatggt
tgccatctaaatttgaagctgagtgctgtcgaggatatatcggcagatgacagatatcaa
gaatctcaagattttaaggctggtgtaaacaaacacgaagttgaaatgtttgaacagtct
aaatgttcagggattcaagccactgctccaattaaagaatttatctccacggatcaagat
tccctcaattgtggaaccaaatggcggaattgctgtccccagatcatgaatgcaagtaaa
atgcaaggtcttcatgatcaaaatagcatacttgatatatcatctgggttcttgcatctc
gctgctgactcattagtccctgaatccatcaccaagaactgcctcagtgattgcagagtt
cttcagcaggtggataagaaatatattgcagttatggctggcagaacatttgctattatt
gaccagcatgctgcagatgaaaggattcggttggaggagctgcgtcagaaggtgttatct
ggagaagcaaagacgattacttttctggatgttgagcaagagttggtgctgccagagatt
ggttatcagttacttcataactatgctaaaccagtggaagagtggggttggctctgcaac
atacaagctgaaggttcagggtccttcaagaggaatttgaatctcctgcacaggcagcca
acagccatcacgctaattgcggtaccctgcatcttaggtgtcaatttatctgactcagat
cttatggagtttcttcagcagcttgctgatacagatggatcatcaacaatgccaccatct
gttcttcgaatccttaattctaaagcatgcagaggtgcaattatgtttggggattccttg
ctacattcagagtgttccctcatcgttgaagaactaaagcagacttctctatgtttccaa
tgtgctcatggtcgaccaactgctgccccgcttgtcaacttggaggcgttgcataagcac
atagctaaaatggcatcattgagtgatggtgaagatcagttgtggcatgggttacgtcga
catgaacttagtctcgaacgtgctgaaaaacgtttaagcttgagtaaaagctaa
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