Prunus dulcis (almond): 117634860
Help
Entry
117634860 CDS
T07328
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00040
Pentose and glucuronate interconversions
pdul01100
Metabolic pathways
Module
pdul_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117634860
Enzymes [BR:
pdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117634860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
117634860
NCBI-ProteinID:
XP_034225017
LinkDB
All DBs
Position
7:21104523..21106159
Genome browser
AA seq
403 aa
AA seq
DB search
MAYRNICNCNNYCVALVVLFMGVLSSNAAAAASNSFNVMKFGAKPDGKTDSTQAFVKTWA
SACSSASGQANAVMYVPKGRFLIKAVVFRGPCKTRRVTVRIDGTLVAPTDYWALGNSGYW
ILFIKVTGVTVVGGSLDAKGAAFWACRRSGKTCPVGARSITFNWANNIVITGLTSINSQQ
THLVINSCNNVVVRNVKLIAPSESPNTDGIHVQSSAGVTITGSILQTGDDCISIGPGTTN
LHISNIKCGPGHGVSIGSLGKELKEDGVQNVTLTNAVFSGSDNGVRIKSWARPSTGFVRN
ILFQNIIMRNVENPIIIDQNYCPNNQACPNQSSGVKISQVTFRNIQGTSATAEAVTFDCS
PSHPCTGIRLQNIKLTYMNKDATSSCKNIDGTSSGLLVPESCL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcttatagaaacatctgcaactgcaacaattattgtgtagcactagttgtgttattt
atgggcgtactatcatccaatgcagcagcagcagctagcaatagttttaatgtgatgaag
tttggtgcaaaaccagatgggaaaacagattccacccaagcattcgtgaagacatgggca
tcagcatgcagctctgcttctggtcaagccaatgctgtcatgtatgtccccaaaggaagg
ttcttgattaaggctgtggtgttcagaggtccttgcaagactagaagagttacagttcgg
atagatggaaccctcgtggccccgacagactattgggctttgggcaactcaggctactgg
attttattcattaaggtcaccggagttacagtggttggtggttccctcgatgccaagggt
gctgcattttgggcttgcaggagatctgggaagacttgccctgttggagctaggtccata
acgttcaattgggcaaacaacattgtgatcactggtttaacatccatcaacagtcagcaa
actcaccttgtaatcaacagctgcaacaacgtggttgttcgaaacgtgaagctgattgcc
ccgagtgaaagccccaacacagacggcattcatgtgcagagctcagctggtgtaaccatc
accggcagcatcttgcaaactggagacgattgcatatcaattggtcctggcaccacaaac
ctccatatcagtaacatcaagtgcggcccaggccatggcgtaagcattggaagtctaggc
aaggagctgaaggaagatggtgtacaaaatgtgacgctaacaaatgcagttttcagtgga
tcggacaatggagtacgaataaagtcatgggctaggcccagcactggcttcgtaaggaac
attctcttccaaaacatcataatgaggaacgttgaaaacccgatcatcattgatcagaac
tattgcccaaataaccaagcctgtcctaatcagagttcgggtgtgaagattagtcaagtg
acgttcagaaatatacaagggacgtcggcaacggcagaggcagtaacatttgactgcagc
cctagtcatccatgtacagggattagattgcaaaacattaagcttacatatatgaacaag
gatgccacgtcatcatgtaagaacattgacggaaccagcagtggactactggtgcctgaa
agttgtctataa
DBGET
integrated database retrieval system