| Entry |
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| Name |
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1
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| KO |
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| Organism |
pdul Prunus dulcis (almond)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pdul00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117635367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pdul03019]
117635367
03012 Translation factors [BR:pdul03012]
117635367
Enzymes [BR:pdul01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117635367
Messenger RNA biogenesis [BR:pdul03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117635367
Translation factors [BR:pdul03012]
Eukaryotic type
Initiation factors
Initiation associated factors
117635367
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
7:11380382..11386588
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| AA seq |
974 aa
MSVRFLLGTSNFSLSRNLLLAAPKIFTFRSGISTLAMSSRPNFRGGRRGGPNSGGGRRGG
SGRGRGGGRGGGEQRWWDPVWRAERLRQQAAEMEVLDENEWWGKMEQMKNGAEQEMVIKR
NFSRNNQQTLSDMAYQLGLHFHAYNKGKALVVSKVPLPDYRADLDERHGSTQKEIKMSTE
TADRVGSLLRSSESQGEVSVNVASGSGQGSKQTSASVNSSKPVSQLEPDTVKEKEKLSRQ
LKERQEQMKVSNSLKAMQLFREKLPAFKMKSEFLRAVSENQVLVVSGETGCGKTTQLPQF
ILEDEISRLHGADCNIICTQPRRISAVSVAARISSERGENLGETVGYQIRLESKRSAQTR
LLFCTTGVLLRQLVQDPMLTGVSHLLVDEIHERGMNEDFLLIILCDLLPRRPDLRLILMS
ATINADLFSKYFGNCPTIHIPGLTFPVAELFLEDILEKTRYIVKSEFDNLEGGNSRRRRR
QQDSKKDPLTELFEDVDIDAHYRNYSTSTRKSLEAWSGSQLDLGLVKNLLYHYLFLRKIV
LATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQP
GVCYRLYPKMIHDAMLQYQLPEILRTPLQELCLHIKSLQLGAVGSFLAKALQPPDPLAVQ
NAIELLKTIGALDDIEGLTPLGHHLCTLPLDPNIGKMLLMGSIFQCLNPALTIAAALAHR
DPFVLPLNRKEDADAAKQSFAGDSFSDHIAVVKAFEGWKEAKHNGTGKTFCWDNFLSPVT
LQMMEDMRIQFLDLLSNIGFLDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGK
RTAFYTKEVGKIDIHPASVNAGVHLFPLPYMVYSEKVKTTNIFIRDSTNISDYALLLFGG
SLIPSKTGEGIEMLGGYLHFSASKSVLELIRKLRGELDKLLNRKINNPGLDVSSEGKGVV
SAVVELLHSQNVRY |
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| NT seq |
2925 nt +upstreamnt +downstreamnt
atgtcagtccgcttcctcttgggcacaagtaacttctcgctttccagaaaccttctcctc
gccgcgcccaaaatattcacctttcgctctggcatttcaaccctcgccatgtccagccgc
cccaacttccgaggcggtcgccgaggcggccccaactccggcggaggccgccgcggaggc
agtggccgaggtcgtggaggtggccgcggcggtggcgaacagcgctggtgggacccggta
tggcgagccgagcgcctgaggcaacaagcagcggagatggaagtgcttgatgagaatgaa
tggtggggaaagatggagcagatgaagaacggggcggagcaggagatggtgatcaagcgc
aattttagtcgcaataatcagcaaaccctatctgacatggcttatcaactggggcttcac
ttccatgcgtataataaagggaaggctcttgtggtcagcaaagttccgttgccggattac
agagcagatcttgatgagcgtcatggttccacacaaaaagagattaaaatgtccacggag
actgccgacagagttgggagtcttttgcgcagctcagagtcacagggagaggtatctgtt
aatgtggcttctgggtctggccagggaagcaaacaaacttctgctagtgtaaattcaagc
aaacctgtctcccagttagagcctgatactgtaaaggagaaagagaaacttagccgtcaa
cttaaggagaggcaggaacaaatgaaggtgagcaatagtttgaaagcaatgcagttgttt
cgagaaaagcttcctgcattcaaaatgaagtctgaatttcttagagctgtgtcagaaaat
caggtcttggtagtctctggggagacaggttgtggaaaaacaacacagcttcctcaattt
attctagaagatgagatttcacgtctacatggtgctgactgcaacataatatgcacacaa
cctcgtcgtatttctgctgtgtctgttgcagctcgtatatcctccgaaaggggagagaat
cttggtgaaactgttggttatcagatccgcctggaatcaaagcgttctgctcaaacacga
ctcctattttgcaccactggagtattacttcgacagttggttcaagaccccatgctaact
ggcgtgagccacttgctagtggatgaaatccatgaaagaggcatgaacgaggacttttta
ctaataattttgtgtgaccttcttcctcggcgtccagatctacgattaattctaatgagt
gccaccatcaatgcggacttgttctccaaatactttggaaattgcccaacaatacatata
ccaggattaactttccctgtggcagaattatttctagaagacattctagagaaaactcgt
tatattgtcaagtcagagtttgacaacttggaagggggaaattccaggagaagaaggaga
cagcaagattccaagaaggatcctttaactgaattatttgaggatgttgatattgatgct
cactacagaaattacagcacatctacaagaaagtctcttgaagcgtggtctggttcacag
cttgacttgggtctggtaaagaacttgctttatcactatctatttcttagaaaaattgtg
ctggctacaaacatagcagagagtagtatcaccatagatgatgttgtctatgtcatagac
tgtggaaaggcaaaggaaaccagttatgatgctttaaacaagttggcttgtctgttacca
tcatggatttcaaaggcttcagcacatcagaggcgagggcgtgctggccgtgtgcagcct
ggagtttgttacagactatatccaaaaatgatccatgatgcaatgctccaatatcagtta
cctgaaattctccgaacacctttgcaagagctatgcctccacatcaaaagtttgcagctt
ggagctgttgggtcttttttggctaaggcacttcagccaccagatcctcttgctgttcaa
aatgcaatcgaacttctcaaaaccattggagctttagatgacatagaggggcttactccg
cttggtcaccatctttgcacactaccattggatccaaacattgggaaaatgcttctaatg
ggttctatctttcaatgcctgaatcctgccttaacaattgcagctgcccttgctcatcgt
gacccttttgtcctaccattaaataggaaagaggatgctgatgctgcaaaacaatccttt
gctggtgattcattcagtgatcacatagctgttgtcaaggcttttgaaggatggaaggaa
gccaaacataacggaacgggaaaaacattctgttgggataactttttatccccggtaacg
ttgcagatgatggaggatatgaggatccagtttctagatctattatcaaatattggcttt
cttgacaaatccaggggtgctaacgcttacaatcaatacagccatgacctggagatggta
tgtgcaatcctctgtgctgggctctatccgaatgttgtgcagtgtaaaagaagaggaaag
cggacagcattctatactaaagaagttggtaaaattgatatccatcctgcatcggtcaat
gctggggttcatttattccctctcccgtacatggtttatagtgaaaaagtgaagacaacc
aacattttcattcgagactctacaaatatatcagattatgctttacttctgtttggtggt
agtcttatccctagcaagactggtgagggtattgagatgcttggaggttaccttcatttc
tctgcatcaaagagtgttttagaattaattcggaaattgcgtggtgaacttgacaagctt
ctaaacaggaagattaacaacccaggattggacgtctcaagcgagggaaagggagtggtt
tcggctgtggttgagcttttgcatagtcaaaatgtacgatattaa |
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