Prunus dulcis (almond): 117635473
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Entry
117635473 CDS
T07328
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdul04121
]
117635473
Enzymes [BR:
pdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117635473
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
117635473
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
Prok-RING_4
zf-RING_16
SPC25
RING_XB3-XBAT31
Prok-RING_1
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
117635473
NCBI-ProteinID:
XP_034225676
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All DBs
Position
7:18822490..18824020
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AA seq
447 aa
AA seq
DB search
MYIQFLFSFTECFPKIIRILGQFQNFNFPMFHSSLIVLLLNRVVFHVEAQISGSNFPSDE
QSNFEPSVAVVIGILAIMFALTFVLLVYAKFCHRRAYVGGNNHQRTEVISTSSRFSGIDK
TVIEALPFFRFSSLRGSKEGLECSVCLSKFEDIEVLRLLPKCKHAFHISCIDHWLEKHSS
CPLCRHRVSSEDLTFITYSDSMRVLWNSQSEHRQDSNIEVFVQREEDRRGSSRFSIGSSF
RKTEKAVDKEEELLIQEEGADMSKEDQKILHKHKHKIVVSDLEFKNRWSNVSSSDLMFLN
SEMLNTMSSNRFSSARLNHEPATATGNEEIMKIREEMEMKRLFENKVSTMNKNASASSPT
FPSTSDYIATSAHASRFMNQGEKRSMSEITALSRFGNLGFKNRNKEPSLLENNVKEERMR
RLWLPIARRTVQWFANREKRTQQPLDV
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtacatacagttccttttttcctttacagaatgctttccaaagattattagaattctg
ggccagtttcaaaatttcaactttccaatgtttcattcaagcttgattgttttgcttctc
aaccgtgtggtcttccatgttgaagcacaaatctcagggtcaaattttccttctgatgaa
cagtctaattttgaaccaagtgttgctgtggttattggtattctcgctatcatgttcgcg
ttaacttttgttctccttgtctatgctaagttctgccatagaagagcttatgttggtggc
aacaatcaccaaagaacagaagttatcagcacaagctctcgattttccggtattgacaag
acagtgattgaggcacttccttttttcagattctcctctcttagagggtccaaggaaggg
cttgaatgttcagtctgcctgtcaaaattcgaagatattgaagttctcagattgctgccc
aaatgcaaacatgcttttcacattagctgcattgatcactggctggaaaagcactcaagc
tgtcctctgtgcaggcacagagttagttctgaggacctaaccttcattacctactcagat
agcatgagggtcttgtggaatagccaatcagaacatcgacaagactcaaacatagaggtc
tttgttcagagagaggaagatcgccgcggttcttcaaggttcagcataggaagcagcttt
cggaaaactgaaaaggctgttgataaagaagaggaattgctaatccaagaagaaggtgct
gatatgtcaaaggaggatcagaaaatcctgcacaagcacaaacacaaaattgttgtgtct
gatcttgagtttaagaacagatggagcaatgtgagttcctctgacctcatgttcctaaat
tctgagatgcttaacacaatgtcaagcaatagattctcttccgcacgtttaaatcatgag
cctgcaacagcaacgggaaatgaggagattatgaagattagggaggagatggagatgaaa
agattgtttgagaataaagttagtacaatgaacaaaaatgcttcagcttcaagcccgact
tttccttccacatcagattacatagcaacttcagcccatgcctcaaggtttatgaatcaa
ggtgagaaaagatcaatgtcagaaatcactgctctttcaagatttgggaatttaggtttt
aagaacaggaataaggagccttctctgcttgaaaacaatgtgaaggaggaaagaatgagg
cggctttggttgcccattgcccgaagaacagtccagtggtttgccaacagagagaaaagg
actcaacagcctttagatgtataa
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