Prunus dulcis (almond): 117635678
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Entry
117635678 CDS
T07328
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117635678
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
90S particles
Other 90S particles
117635678
Pre-60S particles
Other pre-60S particles
117635678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
117635678
NCBI-ProteinID:
XP_034225908
LinkDB
All DBs
Position
7:complement(8393576..8407885)
Genome browser
AA seq
1170 aa
AA seq
DB search
MDEEHHHDLDAEAIEPFNDGADICQQLMDRYAKSSAPQHRHLLATAAAMRSILAAESLPL
TPPAYFAATISAIDDMSSSASQNLDPTGVAALLSFLAMVLPLMPPRSVSSGKAGEAVSML
IELLEREEGLAMSSVRALIKCFGVLVGFCDLEDWGSIKLGLETLLKFSVDRRPKVRKCSQ
DCLESVFKLLHSRAVIKEVSKLVLSKLKGYMPLAVELSSRTKNGPKNLEVLHMLNVVKLT
VPFLSAKVSSKLLSEMNKLVGSRFSALTRHVLQIIEALFKTSRVNAIVSETEEAIASLAS
FVSKGDKNPLDTVMSAATLLKSSVFILNTGESTSWINNLPLVCGSVAGLLTSEASTAAHA
SGILQELISQFVDQRSLLVGESQCSEDGGHETMKASALISICTIFEDSLSTCKGLPNEHL
LDVISALFLKLGGISYIYMKSILLNLANLMTLASGDKSNTDHLQKCIGTAVIAMGPERIL
ELLPISLNASDFTCLNIWLIPILKNYVVGASLGYYLEHIMPLAKSFCRASTKVKKSITSQ
DLQAHARDLLGLLPAFCNLPTDICQKFGSLAEVLVTFLKDSLMHENIAVALQVLVNQNKS
VLDQKDGGGETNSYDLNKMLPKFEHIPTYSKKTATRNIRALTSCSAELLQALTDLFLDSP
PGKRSYLKDAIGCLASVTDSSISKKIFESLLEKFQFKDGGDEFGKVESRTDASSSEEQRN
LSTREKDAQRCVIMELASSLVKGAKEDLINLIYMFAKDTLQNDDEVANREAYNALSRILE
EHTWFCSSQFAELIDLLLGLRSPVDIHSLKSRFACFQTLMIHTLKVDSEVENSKSFLILN
EIIVTLKDAKDEAVREAAYDILHKISVSLRDTSCVSSDGPYQKLINMIMGYLSGGSPHIK
SGAVSVLSVLMYKDTDICLSMPDLVPSLLSLLQGKALEVIKAVLGFVKVLVSCLQARRLQ
NLLPDIVNAVLPWSPVSRHHFKSKVTIIMEILLRKCGTAAVQLVTPDKYKNFVKGILESR
HNKKSSNEIATTDIGTSHEDSSTKRMEDRKRKGFGMRPEKNGSMENRARKRVKKHMPSNP
RTNELHVSSGGGLKRAGRGRQSDGVKSVKDQPERSGKTNKENYNKGPKSGRKRKIDETNM
SKDAAGRQRPGTNSNKSTKLFKHKKVGRKQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaacaccaccacgacctagacgcagaagcaatagagccattcaacgatggc
gcagacatctgccagcagctcatggaccgttacgccaagtcctcggctccgcagcaccgc
cacctcctcgccactgcagccgcaatgcgctcaatccttgccgccgagtcgcttcctctc
actccaccggcctatttcgccgccaccatctccgccatcgacgacatgtcgtcttccgcg
tcccagaacctggaccccactggcgtagcggcgctgttgtcttttctggccatggtgctc
ccgctgatgcctccacggagcgtctcgtcagggaaggcgggtgaggccgtatcaatgttg
attgagcttctggagagagaggaggggctggccatgtccagcgtgagggctttgataaaa
tgttttggggttttggtggggttttgtgatttggaggattggggatccatcaaattgggt
ttggagacattgctcaagttctccgtcgataggcgacccaaggtccgtaaatgttcccaa
gattgtcttgagagtgtttttaagttgctccactctcgtgctgttatcaaggaggtgagc
aagctggtactgtctaagctcaaaggttacatgcctttagcagttgaattaagttcacgg
actaaaaatggacctaaaaatctagaggtccttcacatgctaaatgtggtgaagcttact
gttccctttctctcagcaaaagtcagttcaaaacttctttcagaaatgaataagcttgtt
ggttcacggttctcagcactcacaaggcacgttctccaaattattgaagcattatttaag
acctcaagagttaatgcgattgtttcagagacagaggaggctatagcttctcttgcttca
tttgtgtctaagggagataagaaccccttggacactgtcatgtctgcagcaaccttacta
aaatcttctgtgttcatactaaatactggtgaatcaacatcgtggattaataatcttcct
ctagtttgcggttctgtggcgggtcttttgacttctgaggctagcactgcagcacatgct
tcaggtattttgcaagagctgataagccaatttgtggatcaaagaagtttgctggtgggt
gaaagccaatgttctgaagatggaggacatgagactatgaaagcaagtgcattaatatca
atatgcactatttttgaggattcccttagcacttgtaaaggattgccaaatgagcatctt
ttggacgttatatctgctttgttcctcaagctcggaggaatctcctatatctatatgaaa
agtattcttctcaacctggccaatttaatgacccttgctagtggggacaaatctaacact
gatcatcttcagaaatgtattggaactgcagtaatagctatgggaccagagaggattctt
gaacttttgcccatctctcttaatgctagcgacttcacctgtttaaacatttggttgata
cctattttgaagaattatgttgttggagcatcattgggttactatttggagcatatcatg
cctcttgcgaaatccttttgtcgggccagtactaaagttaaaaagtcaataaccagtcaa
gatctacaggctcatgcacgtgatctgttgggattgctacctgctttctgtaatcttcca
actgatatatgccaaaagtttggatctttggctgaggttttagtgacatttctgaaggac
tccttaatgcatgaaaatattgcagttgccttgcaggttcttgtaaatcagaacaaaagc
gtacttgaccaaaaagatggtggtggtgagacaaattcctatgatttgaacaaaatgctg
ccaaagttcgaacacatacccacttattcaaagaaaactgctaccagaaatattagggct
ttgacatcatgttctgctgagttgcttcaggccctaacagacttatttcttgattcaccg
cctgggaagcgttcatatctaaaggatgccataggatgcttggcttcagtaactgattcg
tccatttccaagaagattttcgaatcattgctcgagaagttccagttcaaggatggtggg
gatgaatttggaaaggtggagagtcgtacggatgcatcatctagtgaagaacaacgcaac
ctaagtactagagagaaagatgctcagagatgcgtgataatggaattagcatcttctctt
gttaaaggagccaaggaggatctcatcaatctaatctatatgtttgctaaagatacttta
cagaatgatgacgaggtagcgaatcgtgaagcatacaatgctttgagcagaattctagag
gaacatacttggttctgttcttcccaatttgctgagttgattgatctgttacttggtttg
agatctcctgttgatatccattctctaaagagtcgtttcgcttgtttccagactttaatg
attcatactttgaaggtagactcggaggtggaaaattcaaagtcgtttcttattctcaat
gagatcatagtaacgttaaaggacgccaaggatgaagcagttagggaagcagcgtatgat
atacttcacaaaataagtgttagcttgagagacacatcatgtgtcagttcagatggacct
taccagaagctaattaacatgataatgggctatctttccggtggatcacctcacataaag
agtggagcagtgtctgtgctatcagtgctgatgtataaggatacagatatttgtctttcg
atgcctgatcttgttccctctcttttatctttgctgcaagggaaagctctagaagttata
aaagctgttttgggcttcgtgaaagtactagtatcttgcttacaggctagacgtctgcaa
aatcttcttccggatatcgtcaatgcagttctcccatggtcgcctgtctcgagacatcat
ttcaaatcaaaggtcacaatcataatggagattctgttaaggaagtgtggtactgcagca
gttcagttagttacgccagataaatacaagaattttgtcaagggtattttggagagccgc
cataacaagaaaagttccaatgaaattgccacaaccgatataggtacaagtcatgaagat
tcttcaaccaaaaggatggaggatagaaaacgcaagggatttggtatgcgacctgaaaag
aatggatcaatggaaaatagagcgagaaaaagggtgaagaaacacatgcccagcaaccct
agaaccaatgagcttcatgtgtcttctgggggtggactgaagcgtgctgggagaggtagg
caatctgatggtgtaaaatcagttaaggaccagccagaaagaagtggaaagacaaacaaa
gagaattataataaagggcccaaaagtggtcgcaagaggaagatagatgagacaaatatg
agcaaggatgcagctgggaggcagagacctggcactaatagtaataaatccaccaaatta
ttcaagcacaaaaaggttgggagaaaacagtag
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