Prunus dulcis (almond): 117635685
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Entry
117635685 CDS
T07328
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03030
DNA replication
pdul03420
Nucleotide excision repair
pdul03430
Mismatch repair
pdul03440
Homologous recombination
pdul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117635685
03420 Nucleotide excision repair
117635685
03430 Mismatch repair
117635685
03440 Homologous recombination
117635685
03460 Fanconi anemia pathway
117635685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdul03000
]
117635685
03032 DNA replication proteins [BR:
pdul03032
]
117635685
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117635685
Transcription factors [BR:
pdul03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117635685
DNA replication proteins [BR:
pdul03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
117635685
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
117635685
MMR (mismatch excision repair)
117635685
DSBR (double strand breaks repair)
HR (homologous recombination)
117635685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF8448
zf-like
Motif
Other DBs
NCBI-GeneID:
117635685
NCBI-ProteinID:
XP_034225920
LinkDB
All DBs
Position
7:17701565..17704608
Genome browser
AA seq
652 aa
AA seq
DB search
MPVQLTPNAIAAISAGDLNSKPLVQVIDIKLLGTQERYRFIVSDAVSCQHAMVATQLNDR
IKTSQVKKGSIIQLTDYISNYFQNHKIIVVLNMETIILDSEIIGDPKPYVESGSAAQKAL
PNNNFEHSVRDSNNYMISQESVRNVQSLRPTSHSGTSLNRGPNLRPTFHSENSVHNMANF
RPTVQPPYQPPPQYKNHGSIVKNEAPARIIPINALNPYQGRWAIKARVTAKGDPRRYNNA
RGDGKVFSFDLLDSEGGEIRVTCFNAVLDRFYDTIEVGRVYLISKGSLKPAQKNFNHLKN
DWEITLDASSTVELCPDEDGSIPEQKFSFRHISEIENVDSNSIVDIIGIVISVNPSVPIM
RKNGMETQRRIVNLRDWSGKSVELTLWGDVCNREGQRLEDMLASGLFPVLAVKAGKINDF
SGKSVGTIHSTQLFINPDIPDSYSLREWFDQGGKDTASVSISKDIVPGGIKNEIRKTVSQ
IKDEGLGRSDKPDWVTVKATISFIKTDSFCYTACPLMIGDRQCNKKVSRSGNRGWQCDRC
DQEFEECDYRYLLQAQIQDNTGLTWATAFQESGEEILGCSAKDLYLLKEQDDSRFGDIVR
SSIFNQFLFRLKIKEETYGDEQKVKITVVKADKVNYSSESKYMLDMILKFSR
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaactgacgccgaacgcgatcgcggcgatctcagccggcgacttgaactcg
aagccattggtgcaggtaatcgatattaagctcctcggcacgcaggagaggtaccgtttc
atagtctccgatgccgtttcgtgccagcacgccatggtcgctacgcagctcaacgaccga
atcaagaccagccaagtcaagaaaggttccatcatccagctcaccgattacatttccaac
tacttccagaaccacaagattattgtagtgctgaacatggaaactatcatactggactct
gagattattggggatccaaaaccatatgttgaatctggttcagctgctcaaaaggcattg
cctaataacaattttgagcactcagtcagggatagcaataactatatgatttctcaagaa
tctgtacgcaatgtgcagagtctcagacctacttctcattcagggacctctcttaaccgt
gggccgaatctcagacctacttttcattctgaaaactctgttcacaatatggcaaatttc
cgacctactgtccaacctccttaccagccacctccacagtacaaaaatcatggctcaatc
gtaaagaacgaggcaccagcacggatcattcctattaatgctctgaatccttatcaggga
aggtgggctatcaaggcaagggtcacagcaaaaggggatccccgtcggtataataatgct
cgaggagatggtaaggttttctctttcgatctccttgactctgaaggaggggaaatacga
gtgacctgcttcaatgctgttcttgaccgcttctacgatactattgaggttggtagagtt
tacttgatttcaaagggtagcttgaaacctgcccagaagaatttcaaccatctgaaaaac
gactgggagataacgttggatgcaagttcaactgtggagctctgccctgatgaagatggt
tctataccagagcagaagttttccttcaggcatattagtgaaattgagaatgttgatagt
aattctatcgttgacattattggtattgtgatatctgtcaacccttctgttcctattatg
aggaagaatggtatggaaactcagcgaagaattgtgaatctaagggattggtcaggcaag
agtgttgagctaaccctttggggagatgtctgcaacagggaaggtcaaaggcttgaagat
atgttggcttctgggttatttccagttttagctgtcaaagctgggaagattaatgatttt
agtgggaagtccgtaggaacaattcattctacacagctgttcataaacccagatatccct
gactcttatagcttgagagagtggtttgatcaagggggtaaggatactgcttctgtgtcg
atttctaaagacattgttccaggaggaattaagaatgagatacgcaaaactgtttctcag
atcaaggatgaaggtcttggaagatcagataagccggattgggtcactgtgaaggccacg
atatctttcattaaaacagattctttctgttacacagcttgcccattgatgattggagat
aggcagtgtaacaaaaaagtgtcaaggtcaggaaacagagggtggcagtgtgacaggtgc
gatcaagaatttgaggagtgtgattatagatatctgcttcaagcccaaattcaagacaat
actggtttgacttgggcaacggctttccaggaatctggggaagagatcttgggttgctca
gcaaaagacttgtacttgttgaaagagcaggatgattcaagattcggagacatagttcgg
agcagtatctttaaccaattccttttcaggcttaaaatcaaagaggagacgtacggtgac
gagcagaaggtgaagatcacggtcgttaaggcagataaggtgaactattcttcagagagc
aagtacatgcttgacatgattttgaagttttctaggtaa
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