KEGG   Prunus dulcis (almond): 117635905
Entry
117635905         CDS       T07328                                 
Name
(RefSeq) ubiquitin receptor RAD23c-like
  KO
K10839  UV excision repair protein RAD23
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03420  Nucleotide excision repair
pdul04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117635905
  09124 Replication and repair
   03420 Nucleotide excision repair
    117635905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pdul03051]
    117635905
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117635905
Proteasome [BR:pdul03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    117635905
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      117635905
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD UBA_7 Rad60-SLD_2 TECR_N UBA_RAD5A Dsc3_N UBA_3 Ubiquitin_4 Crinkler
Other DBs
NCBI-GeneID: 117635905
NCBI-ProteinID: XP_034226181
LinkDB
Position
1:complement(26700736..26705470)
AA seq 385 aa
MKIFVKTLKGTHFDVAVKPEDTVSDVKKQIETSQGSDVYPASQQMLIHQGKVLKDSTTLD
ENKVAENSFVVIMLTKSKSSLGEGSGASTATITKTPQPSAPSAAPTVTLTAPQAPIPTSA
SPASVTTPAPVSSATTEVESNPYGQAASDLVAGTNLEGTIQQILDMGGGTWDRDTVVRAL
RAAFNNPARAIDYLYSGIPEQPEVPPVAHIPVSGEAANLPAQSPQSAQPASTPPSGPNAN
PLNLFPQGLPNVGAGGAGAGNLDFLRDSQQFQALRAMVQANPQILQPMLQELGKQNPNLM
RLIQQHQADFLRLINEPVEGGEGNILGDAAVPQSISVTPEEREAIERLEAMGFDRAIVLE
VFFACNKNEELAANYLLDHMHEFEE
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgaagatttttgtcaagactcttaagggcactcacttcgatgtcgcagtgaagcctgag
gacacggtttctgatgtgaagaaacagatagaaactagtcaaggttcagatgtatatcct
gcttcacaacagatgctaattcatcaaggaaaagtacttaaagatagcacaacattggac
gaaaacaaagttgctgaaaacagctttgttgtgataatgttgactaagagtaagagctcg
cttggtgaaggttcaggtgcatcaactgcgactataactaagacaccacagccaagtgca
ccttctgctgctccaactgtgacattaacggcacctcaggctccaataccaacctcagca
tcgcctgcttcggttaccacacctgctcctgtctcttcagctaccacagaggtagaatct
aatccctacggccaagcagcatctgatctggtagctggaactaacttggagggaacaatt
cagcaaattctggatatgggtggaggtacttgggacagggatactgttgtacgtgctctt
cgtgctgctttcaacaacccagcgagagctattgactatctttattctggtatccctgag
caacctgaagttccacctgtagcccatattcctgtgagtggggaagctgcaaaccttcca
gcacaatctccacaatcagcacaaccagcatccactcctccaagcggacctaatgccaat
cctttaaacctttttccccagggtcttccgaatgtgggtgctggtggtgctggtgcaggc
aatcttgattttctgcgtgacagccaacagttccaagctttgcgagctatggtgcaggct
aatccacaaatattgcagcctatgcttcaagagttggggaaacaaaatcctaatcttatg
aggctaattcaacagcatcaggctgacttccttcgcctgattaatgaacctgtggaaggt
ggagaagggaacatattgggtgatgcagcagtgccgcagtcaataagtgttactcctgag
gagcgtgaagctatagaacgtcttgaagcaatgggatttgatcgagcaattgtattggag
gtgttctttgcctgcaacaagaatgaagagttggctgccaactacctcttagaccacatg
catgaatttgaggaataa

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