Prunus dulcis (almond): 117635947
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Entry
117635947 CDS
T07328
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdul04121
]
117635947
Enzymes [BR:
pdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117635947
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
117635947
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_16
RING_XB3-XBAT31
Prok-RING_4
Prok-RING_1
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
117635947
NCBI-ProteinID:
XP_034226233
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All DBs
Position
7:18824665..18826025
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AA seq
441 aa
AA seq
DB search
MLPRMIKILGQFQDFNLPMFHSNMIVLLLNCVVFHVEAQSLGSSTDTTSEEQSSFQPGVH
MVIGVLSVMFALTFALLVYAKHCHREAPVYGNNHTGTRLISTSSRFSGIDKTVIEALPFF
RFSSLKGSKEGLECSVCLSKFEDVEVLRLLPKCKHAFHISCIDHWLEKHSSCPLCRHKVS
SEDLTFITYSNSMRFLWNNQSEHRQDSNIELFVRREEEHRGSSRFSIGGSFRKSEKVVDK
EEEMLIQEEAADETEEGQKILHKHKHKIVVSDFEFKNRWSNVSSSDLMFLNSEMLNTMSS
NRFSSTHFSNEQFSTAETTGNEDIMKIREEMGMKRLFENKVSTMNKNSTASNPILPSTSN
GIATSADASSSMNPGEKRSMSEITALSRFGNLGFKNRTREPSLLENNVKEERRRRLWLPI
ARRTVQWFANREKRPQPPLDV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctaggatgattaaaattttgggtcagttccaagatttcaatcttccaatgttt
cattcaaacatgattgttttacttctcaattgtgtagtcttccatgttgaagcacaatcc
ttaggcagcagcacagatactacttctgaggaacaatctagttttcaaccaggtgttcat
atggttattggtgttctctctgtcatgtttgcactaacttttgctctccttgtctatgct
aaacactgccatagagaagctcctgtttatggaaacaatcacacgggtacaagacttatc
agcacaagctctcgattttccggtattgacaagacagtgattgaggcacttccttttttc
agattctcctctcttaaagggtcaaaggaaggtcttgaatgttcagtctgcctgtcaaaa
ttcgaagatgttgaagttctcagattgctgcccaaatgcaaacatgcttttcatattagc
tgcattgatcactggctggaaaagcactcaagctgtcctctgtgcagacacaaggttagt
tctgaggacctaacattcattacctactcaaatagcatgaggttcttgtggaataaccaa
tcagagcaccgacaagactcgaatatagagctctttgttcggagagaggaagagcatcgt
ggttcttcaagattcagcataggaggcagctttcgaaaatccgaaaaggttgttgataag
gaagaggaaatgttaatccaagaagaagctgctgatgagacagaggagggtcagaaaatc
ctgcacaagcacaaacacaaaattgttgtatctgactttgagtttaagaacagatggagc
aacgtgagttcctctgacctcatgttcctgaactcagagatgcttaatacaatgtcaagc
aatagattctcttcaacacattttagtaatgagcagttttcaactgcggaaacaaccggg
aatgaggacattatgaagattagggaggagatggggatgaaaagattgtttgagaacaaa
gttagtacaatgaacaaaaacagtacagcttcaaacccaattttaccttctacatcaaat
ggcatagcaacttcagctgatgcctcaagttctatgaatccaggtgagaaaagatcaatg
tcagaaatcactgctctttcaagatttgggaatttgggttttaagaacaggaccagggag
ccttctttgcttgaaaacaatgtgaaagaggaaaggaggaggaggctttggttgccaatt
gccagaagaacagtccagtggtttgccaacagagagaaaaggcctcaaccgcctttagat
gtgtaa
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