KEGG   Prunus dulcis (almond): 117635963
Entry
117635963         CDS       T07328                                 
Name
(RefSeq) target of rapamycin complex subunit LST8 isoform X1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    117635963
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pdul04131]
    117635963
Membrane trafficking [BR:pdul04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    117635963
   mTORC2 complex
    117635963
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_Nup120_160 Beta-prop_HPS5 NBCH_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_Vps41 Beta-prop_IFT140_2nd Beta-prop_SCAP Beta-prop_IP5PC_F Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_DCAF12 Beta-prop_SPT8 PROPPIN Beta-prop_NUP159_NUP214 Nucleoporin_N Mala_s_1-like Beta-prop_VPS8 Beta-prop_WDR35_TULP_N CFAP43_N Beta-prop_WDR19_2nd Beta-prop_WDR35_2nd
Other DBs
NCBI-GeneID: 117635963
NCBI-ProteinID: XP_034226257
LinkDB
Position
7:complement(9299995..9304609)
AA seq 325 aa
MPTQEEIKMSQQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRFLA
AAGNPHIRLFDVNSNSPQPVMSYDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPG
CQREYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVM
WDGSLVVAANNHGTCYVWRLLRGTQTMTNFEPLHKLQAHKGYILKCLLSPEFCEPHRYLA
TASSDHTVKIWNVDGFTLEKTLVGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGED
IRVYQGHHKATICCALHDGAEPSSS
NT seq 978 nt   +upstreamnt  +downstreamnt
atgcccactcaggaggagattaagatgagccagcaaccatcggtgatcctagcaacggct
agctatgaccacactattcggttttgggaggccaaaagtggccgctgctatcgtaccatc
caataccctgattcacaagttaataggctcgagattacgccagataaacgcttcctggct
gcagccggcaatcctcacattcgattatttgatgttaattcaaacagccctcaaccggtg
atgagctatgattcacatactaataatgtaatggcagtgggatttcaatgtgatggaaac
tggatgtattcaggttctgaggatggtacagtaaaaatttgggatttgagagctccaggt
tgtcaacgggaatatgaaagccgtgcagctgttaacactgttgtgctgcacccaaatcag
actgaactgatatctggggaccaaaatggcaatattcgtgtttgggatttgacagcaaat
tcatgcagctgcgaactggttccagaggtggatacggctgtaaggtcattaacagtgatg
tgggatgggagtctggttgttgcagcaaataatcatggtacatgctatgtttggcgcttg
ttgcggggaacccagactatgacaaattttgagccacttcataagctgcaagcacacaag
ggatacatcctcaaatgtcttctttcacctgaattctgtgaaccccacagatatctggcg
accgcctcttctgaccacactgtcaagatatggaatgttgatggtttcacattagagaaa
actctagtaggacatcagcggtgggtatgggactgtgttttctcagtagatggtgcctat
cttataacagcttcctcagatgcaacagcaagactttggtccatgtccactggtgaagat
atcagggtgtatcaggggcatcacaaagcaaccatttgttgtgcacttcatgatggagct
gaaccttcttcatcctga

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