KEGG   Prunus dulcis (almond): 117636432
Entry
117636432         CDS       T07328                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
pdul  Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pdul04121]
    117636432
Enzymes [BR:pdul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117636432
Ubiquitin system [BR:pdul04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117636432
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-rbx1 zf-RING_10 zf-Nse zf-ANAPC11 Prok-RING_4 zf-RING_4 Zn_ribbon_6 TerY_C TRAF3_RING zf-RING_6 Sina_RING Zn_ribbon_RlmA
Other DBs
NCBI-GeneID: 117636432
NCBI-ProteinID: XP_034226807
LinkDB
Position
8:complement(16673560..16677036)
AA seq 229 aa
MDCVFMEFIQVFQASSWIGDHTYNMSTRAARYVNRRKDRVDLDLNSAPPGDNRDQEGTST
PADPQNNQATLLGQSAPPNMIDVEAIDDDVVESSPRAFAEAKNNARRNQRRITVDVDLER
TRVTRNKRRRVAPNQTIINCDFYINLESNNNSSSAKESVAQPAPPPPKEPTFSCPICMAP
LVEEMSTKCGHIFCKACIRAAIGAQGKCPTCRRKVTMKELIRVFLPTTR
NT seq 690 nt   +upstreamnt  +downstreamnt
atggactgcgtttttatggaattcattcaggtttttcaagcttcatcttggataggagac
catacatataacatgagcactcgagcggccaggtatgtaaaccgaaggaaggatcgggtg
gacttagacctcaatagtgcgccacctggtgacaatcgggatcaggagggaacttcaacc
ccagcggatcctcagaataatcaagctaccctgctagggcagtctgcaccacctaatatg
attgatgttgaggctattgatgatgatgttgttgaatcctcccccagggcttttgctgag
gctaaaaacaatgccaggaggaaccaaagaaggatcactgttgatgtggatttagaacga
actagggtcactcgtaacaagcgcagaagagttgcaccaaaccaaactataattaattgt
gatttctacataaatttggaaagcaataacaattccagctccgcgaaagagagtgttgca
caaccagcacctcccccaccaaaggagcccacttttagctgccccatctgcatggcccca
ttagttgaggagatgtcaacgaaatgtggtcacattttctgtaaggcgtgcattagggct
gcgataggtgcacagggtaaatgccctacgtgtaggagaaaagtaactatgaaagaactc
attagggtattcctccctacgaccagatga

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