Prunus dulcis (almond): 117636554
Help
Entry
117636554 CDS
T07328
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03018
RNA degradation
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117636554
09123 Folding, sorting and degradation
03018 RNA degradation
117636554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117636554
03041 Spliceosome [BR:
pdul03041
]
117636554
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117636554
mRNA degradation factors
5'-3' decay
Lsm complex
117636554
Spliceosome [BR:
pdul03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117636554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
117636554
NCBI-ProteinID:
XP_034226989
LinkDB
All DBs
Position
8:complement(19816471..19818720)
Genome browser
AA seq
151 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGGREDGPGGRQTKGIGRGLD
DGGSKGAGGGRGRGGPAGKAGGGRGGGRGRA
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgctccctctatctttgctgaagaccgcccaagggcaccccatgctggtagaattgaaa
aatggggagacctacaatggccatttggtcaactgcgacacttggatgaacatccatctt
cgagaagtcatttgtacctccaaagatggagacaggttttggagaatgcctgaatgttac
atccgtgggaatacgataaagtatcttagagttcctgatgaggtgatagacaaagttcaa
gaagagaccaagagccgttcagataggaaaccacctggagtagggcgtggaagaggaaga
ggagggagggaggatggtcctggtggacgtcagactaaaggcattggacgtggcctagat
gatggtggttctaagggtgctggtggaggccgaggcagaggtggaccagctgggaaggcc
ggtggaggcagaggtggaggacgtggacgagcgtga
DBGET
integrated database retrieval system
