Prunus dulcis (almond): 117636574
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Entry
117636574 CDS
T07328
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117636574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117636574
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117636574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
Zn_ribbon_RanBP
MMR_HSR1
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
117636574
NCBI-ProteinID:
XP_034227031
LinkDB
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Position
1:complement(35313287..35319859)
Genome browser
AA seq
766 aa
AA seq
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MPRKVNYGVDYDDDYDVYDDYDYDDDSAIKKNGKALESKRETERPEVWRCSICTYDNEGS
MSACDICGVLRNPVVKSNSDKKTVEGRCKDSGASIMAKSLFASLPCQTPKQAVLFHQQKD
DFVIEEGNNFHKLGDFQGPIHEFYNAFNIHNNHHINIAPFKFDVPSPDDLVSNGLWSSRT
GSKASVNDLKSSKVSSKVAKKSGAVSGQSSAEWSDSSSAIGERSKQDRFDEGNQLENQTV
SYHDGSSDIITLQANGRLCDGSSAPQPRSRHDSVDGSTNSSVIRGKQQSVTSGLKNLDLD
ARSGSSNNVNVRESHSQAEYKPENWMLPDQAVDTLTQLNLAIVGHVDSGKSTLSGRLLHL
LGRISKKEMHKYEKEAKLQGKGSFAYAWALDESAEERERGITMTVAVAYFDSRKYHVVVL
DSPGHKDFVPNMISGATQADAAILLVDASVGAFEAGVDGSKGQTKEHAQLIRSFGVDQII
VAVNKMDIVEYSKDRFDLIKERLGTFLRSCGFKDSLVSWIPLSAMENQNLVEAPSDVGFS
SWYHGPYLLDAIDSLQPPTREFSKPLLMPICDVIKSSSQGQVSACGKLEAGALRSGFKVL
IMPSGELGTVRSLERDSQACVIARAGDNVAVTLQGIDGGHVMAGGVLCHPGFPVAVAKHL
EMKVLVLDVTTPILIGSQLEFHIHHAKEAARVVKISSLLDRKTGKVARKAPRCLTAKQNA
IVEVVLHQPVCVEEFSNSRALGRAFLRALGSTIAVGIVTRIIEEQK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagtaaactacggagttgattatgatgatgactacgatgtctatgacgat
tatgattatgatgatgattctgccataaaaaagaatggcaaagcacttgagtcaaagcgg
gaaactgaaaggcctgaggtctggcgttgttccatttgcacgtacgacaatgaggggagc
atgtctgcatgcgacatttgtggggttcttcgaaaccctgtggtgaaaagcaatagtgat
aagaaaacagttgaaggcagatgcaaagattctggagcatccataatggccaagtctctt
tttgcatcattgccgtgccagacacccaaacaggctgtactatttcatcagcagaaagat
gattttgtgatagaagagggcaataatttccacaagcttggggatttccaaggacctatt
catgaattctataatgcgtttaacattcataacaatcaccatattaatatagctcctttc
aagtttgatgttccatccccagatgatttggtttctaatggattgtggtcctctagaacg
ggttcaaaagccagtgttaatgacttgaaatcttcaaaagtttcctcgaaggttgctaag
aagagtggtgcagttagtggacaatcaagtgctgaatggtcagatagctcctctgcaata
ggggaaagaagtaaacaagatagatttgatgagggaaaccagttggagaatcagacagtc
agctatcatgatggaagtagtgacataattactttacaagcaaatggtagattgtgtgat
ggttcgtcagcaccgcagccaagaagcagacatgacagtgtggatgggagcacaaattct
tctgtgattaggggcaagcagcagagtgttaccagtggcttgaaaaatttggatttggat
gctagatctggatcttctaataatgttaatgttagagaatctcattcacaagcagagtac
aaacctgaaaattggatgctccctgaccaagctgtagatacactgactcaactaaatctt
gcaatagttggccatgttgattctggaaaatcaacactctcaggtagactgcttcatctt
ttgggaaggatatctaaaaaagaaatgcacaaatatgagaaagaggcgaagttacagggt
aagggctctttcgcatatgcttgggcattggatgagagtgcagaagaaagggaaagagga
ataactatgacagtggccgttgcatattttgattccagaaaatatcatgttgttgtgctc
gactcgcctggccataaagattttgttccaaacatgatatctggggcaacacaagctgat
gccgcgatacttctcgtagatgcttcagttggcgcattcgaagctggtgtggatggtagc
aagggacagacaaaggagcatgcacaacttatcagaagctttggtgttgatcaaattata
gttgccgtgaacaagatggatattgttgagtactccaaggatcggtttgatttgattaaa
gagagacttggaacatttctccgttcctgtggcttcaaagattctttggtgtcttggatt
ccactgagtgccatggaaaatcagaatttggtagaagctccttctgatgtcggtttttct
tcttggtaccatggaccttacctgttggatgcaattgattccctccaacctcccacaaga
gagttttcaaagccactgctcatgcctatatgtgatgtcattaaatcttcttcacaagga
caggtatctgcttgtggtaaattggaagcgggagctctccgaagtggattcaaggttctg
attatgccttcgggagaattagggaccgtacgctctttagaacgtgactctcaggcttgt
gtaattgcgagagctggagacaatgtggctgttactctgcaaggcatagatggaggtcat
gtgatggcaggaggtgtgctctgtcaccctggtttcccagttgcagttgcaaaacatttg
gaaatgaaagtgctggttttggatgttacaaccccaattttaattggctctcagttggaa
tttcacatacaccatgcaaaggaggctgccagagttgtaaaaatatcgtcattacttgat
cgcaagactggcaaagtggcaagaaaggctcctcgctgtcttactgcaaagcagaacgcc
attgtagaggttgttttgcaccagccagtttgtgtggaagagttctctaattccagagcc
cttgggagggcatttttaagggcattaggaagcactattgccgttggcattgtaacccgg
attatagaggagcagaaatag
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