KEGG   Prunus dulcis (almond): 117636574
Entry
117636574         CDS       T07328                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117636574
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117636574
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117636574
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 GTP_EFTU_D4 Zn_ribbon_RanBP MMR_HSR1 Mg_chelatase
Other DBs
NCBI-GeneID: 117636574
NCBI-ProteinID: XP_034227031
LinkDB
Position
1:complement(35313287..35319859)
AA seq 766 aa
MPRKVNYGVDYDDDYDVYDDYDYDDDSAIKKNGKALESKRETERPEVWRCSICTYDNEGS
MSACDICGVLRNPVVKSNSDKKTVEGRCKDSGASIMAKSLFASLPCQTPKQAVLFHQQKD
DFVIEEGNNFHKLGDFQGPIHEFYNAFNIHNNHHINIAPFKFDVPSPDDLVSNGLWSSRT
GSKASVNDLKSSKVSSKVAKKSGAVSGQSSAEWSDSSSAIGERSKQDRFDEGNQLENQTV
SYHDGSSDIITLQANGRLCDGSSAPQPRSRHDSVDGSTNSSVIRGKQQSVTSGLKNLDLD
ARSGSSNNVNVRESHSQAEYKPENWMLPDQAVDTLTQLNLAIVGHVDSGKSTLSGRLLHL
LGRISKKEMHKYEKEAKLQGKGSFAYAWALDESAEERERGITMTVAVAYFDSRKYHVVVL
DSPGHKDFVPNMISGATQADAAILLVDASVGAFEAGVDGSKGQTKEHAQLIRSFGVDQII
VAVNKMDIVEYSKDRFDLIKERLGTFLRSCGFKDSLVSWIPLSAMENQNLVEAPSDVGFS
SWYHGPYLLDAIDSLQPPTREFSKPLLMPICDVIKSSSQGQVSACGKLEAGALRSGFKVL
IMPSGELGTVRSLERDSQACVIARAGDNVAVTLQGIDGGHVMAGGVLCHPGFPVAVAKHL
EMKVLVLDVTTPILIGSQLEFHIHHAKEAARVVKISSLLDRKTGKVARKAPRCLTAKQNA
IVEVVLHQPVCVEEFSNSRALGRAFLRALGSTIAVGIVTRIIEEQK
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgcctcgtaaagtaaactacggagttgattatgatgatgactacgatgtctatgacgat
tatgattatgatgatgattctgccataaaaaagaatggcaaagcacttgagtcaaagcgg
gaaactgaaaggcctgaggtctggcgttgttccatttgcacgtacgacaatgaggggagc
atgtctgcatgcgacatttgtggggttcttcgaaaccctgtggtgaaaagcaatagtgat
aagaaaacagttgaaggcagatgcaaagattctggagcatccataatggccaagtctctt
tttgcatcattgccgtgccagacacccaaacaggctgtactatttcatcagcagaaagat
gattttgtgatagaagagggcaataatttccacaagcttggggatttccaaggacctatt
catgaattctataatgcgtttaacattcataacaatcaccatattaatatagctcctttc
aagtttgatgttccatccccagatgatttggtttctaatggattgtggtcctctagaacg
ggttcaaaagccagtgttaatgacttgaaatcttcaaaagtttcctcgaaggttgctaag
aagagtggtgcagttagtggacaatcaagtgctgaatggtcagatagctcctctgcaata
ggggaaagaagtaaacaagatagatttgatgagggaaaccagttggagaatcagacagtc
agctatcatgatggaagtagtgacataattactttacaagcaaatggtagattgtgtgat
ggttcgtcagcaccgcagccaagaagcagacatgacagtgtggatgggagcacaaattct
tctgtgattaggggcaagcagcagagtgttaccagtggcttgaaaaatttggatttggat
gctagatctggatcttctaataatgttaatgttagagaatctcattcacaagcagagtac
aaacctgaaaattggatgctccctgaccaagctgtagatacactgactcaactaaatctt
gcaatagttggccatgttgattctggaaaatcaacactctcaggtagactgcttcatctt
ttgggaaggatatctaaaaaagaaatgcacaaatatgagaaagaggcgaagttacagggt
aagggctctttcgcatatgcttgggcattggatgagagtgcagaagaaagggaaagagga
ataactatgacagtggccgttgcatattttgattccagaaaatatcatgttgttgtgctc
gactcgcctggccataaagattttgttccaaacatgatatctggggcaacacaagctgat
gccgcgatacttctcgtagatgcttcagttggcgcattcgaagctggtgtggatggtagc
aagggacagacaaaggagcatgcacaacttatcagaagctttggtgttgatcaaattata
gttgccgtgaacaagatggatattgttgagtactccaaggatcggtttgatttgattaaa
gagagacttggaacatttctccgttcctgtggcttcaaagattctttggtgtcttggatt
ccactgagtgccatggaaaatcagaatttggtagaagctccttctgatgtcggtttttct
tcttggtaccatggaccttacctgttggatgcaattgattccctccaacctcccacaaga
gagttttcaaagccactgctcatgcctatatgtgatgtcattaaatcttcttcacaagga
caggtatctgcttgtggtaaattggaagcgggagctctccgaagtggattcaaggttctg
attatgccttcgggagaattagggaccgtacgctctttagaacgtgactctcaggcttgt
gtaattgcgagagctggagacaatgtggctgttactctgcaaggcatagatggaggtcat
gtgatggcaggaggtgtgctctgtcaccctggtttcccagttgcagttgcaaaacatttg
gaaatgaaagtgctggttttggatgttacaaccccaattttaattggctctcagttggaa
tttcacatacaccatgcaaaggaggctgccagagttgtaaaaatatcgtcattacttgat
cgcaagactggcaaagtggcaagaaaggctcctcgctgtcttactgcaaagcagaacgcc
attgtagaggttgttttgcaccagccagtttgtgtggaagagttctctaattccagagcc
cttgggagggcatttttaagggcattaggaagcactattgccgttggcattgtaacccgg
attatagaggagcagaaatag

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