Prunus dulcis (almond): 117636606
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Entry
117636606 CDS
T07328
Name
(RefSeq) general transcription factor 3C polypeptide 3-like isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117636606
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
117636606
TFIIIC, fungi type
117636606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_6
TPR_YpiA_C
TPR_9
CFAP70_TPR_C
TPR_12
TPR_11
TPR_1
TPR_8
TPR_17
ANAPC3
TPR_15
NatA_aux_su
TPR_Psidin_N
TPR-S
TPR_7
TTC22_N
ARM_TT21_5th
ARM_TT21_N
CFAP70_mid_TPR
Alkyl_sulf_dimr
Coatomer_E
TPR_NUP160_120_M
Foie-gras_1
NatB_MDM20
DUF8817
Motif
Other DBs
NCBI-GeneID:
117636606
NCBI-ProteinID:
XP_034227076
LinkDB
All DBs
Position
8:8016180..8020312
Genome browser
AA seq
1027 aa
AA seq
DB search
MIICIYILLLCLHYIYIYIYISLSLSLSLSQNLWYSWMIICLFDKFDLFYFGTVNINYHC
NGDGDGGKTGSGYRIVFASVGFSSFIFSFGSPRGFIWLYILMDKEDNATGDHEEASQYAF
AVCLEEDMEEDVEDDEEDEEDGEVDEEDEDEDEDENTFSFKDGVNPLDFVEDDAFGDQVY
EQFVGMGYEALAERKRKALEDSRPEGSVKKARHEDVTGASMEEIMEAMNYGMQRRTRKPK
KKGRRKGSKKKLTPEITRRLGEATLHYVHGRYEEAIPILAEIVKQAPDLSETYHTLGLVH
DNLGNELKALNCFTIAALLAPKNPALWELLFGWFNRRGDAHKAIYCLSRAISADPKNIDL
KLGRASLYVKLGDYHKAAASYEQIVQACPDNVEALKTAAVMYDRSGQHEQSIHILEAYLR
DHPTEADPSVIDLLASILMENNAHNEAIQHIEHAQLVFCSNKAMPLTMKIKAGICHAYLG
NMEKAETLFSALEQQSADQADLIAKVADSFMSLGHYSSALKYYLMLKGNTKYNKGFLHMK
IARCHLSLNDRVQAILWFYEAVKTLEDNIETRLTLASILLEEAREDEAILLLSPPKNLDR
FEAQTNKSEPWWCNGKVKLKLCYIYRAKGMLKEFVDAIYPLVHESLRIESLQQKVKVKKR
LTKSVLLERVKVLDDHQTDNLLCRSRPVAPASDLLKAARAKKLLQKKAKVKEEKRAEAMA
AGVDWQSDDSADDPPEEIHQEPPLPDLLKDKENHGLVIDLCKSLASLHRYCEALEIINLA
LKSTRNMCSVAEELRSLGAQIAYNTPDPEHGVDCVKYIADQHPYSNAAWNCYYKVITRLD
DWYARHYKFLRGKRDKLKDCAPPSIISGHHFTKKSRHQDAAREYLEAYKLLPENPLINLC
VGTALINLALGHRLQNRHQCVAQGLAFLHKNLQLCEFSQEAFFNIARAYHHVGLVTLAAW
HYGKVLAMHVKDYPIPKLPHEKPESVENRLLGYCDLRREAAFNLHLIYKKSGAVDLARQV
LRDHCTF
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgatcatatgtatatatatcttactcctttgtttgcattatatatatatatatatatat
atatctctctctctctctctctctctctctcagaatttatggtattcttggatgatcata
tgcttgtttgataaatttgatttgttctattttgggactgtaaatattaattatcattgt
aatggtgatggtgatggtgggaaaacaggttctggatatcgcatagtttttgccagtgtg
ggcttttcttcatttattttttcttttggctctccacgagggttcatttggctgtacatc
ttgatggataaggaagacaatgctactggtgatcatgaagaggcttcacagtatgcattt
gctgtgtgccttgaagaagacatggaagaagatgtcgaggatgatgaagaggatgaagaa
gatggggaagtggacgaagaggatgaggatgaggatgaggatgagaatactttcagtttc
aaagatggggttaatcccttggattttgtggaagacgatgcttttggtgaccaagtttat
gagcagtttgtgggcatgggttatgaggctctagctgaaagaaagagaaaagcacttgag
gatagtcggcctgaaggttctgttaagaaggccaggcatgaggatgttactggagcaagc
atggaggaaataatggaggccatgaattatggtatgcaaaggagaacaaggaagcccaag
aaaaaaggtagacggaaaggatcaaagaagaaacttactcctgagattactcgaaggctt
ggtgaagctactcttcactatgtacatggacgttatgaagaggccatacccatcttggca
gaaattgttaagcaggcaccagatttgtctgagacgtatcatacacttggacttgtccat
gataatcttggtaacgaattgaaagccttgaattgcttcacaattgctgcacttttagca
cccaaaaatccagctctttgggaactgctctttggttggttcaatagacgaggtgacgct
cataaagccatttattgcctttcaagagcaatatcagcagatcctaaaaatattgacctg
aaattgggtcgtgcttcactctatgttaagcttggagattatcataaagctgctgcatcg
tatgaacagatagtacaagcctgtcctgataatgttgaagcactcaagacagcagctgtg
atgtatgacagaagtggtcagcatgagcagtctattcatattctggaggcttatctcaga
gatcatccaaccgaagctgatcctagtgtcattgatctgctagcttccatacttatggaa
aataatgcacataatgaagcaattcagcatattgagcatgcacaactcgtattctgttca
aataaagcgatgcctttgacaatgaaaattaaagcaggaatctgccatgcttacctcgga
aatatggagaaggcagaaactctctttagtgctcttgaacagcagagtgcagatcaggct
gacttgattgctaaagtcgcagactcatttatgagtcttgggcattatagttctgcattg
aagtattatttaatgttgaaaggaaacaccaaatataataaaggctttttacatatgaaa
attgctcgatgtcatttgtccttgaatgacagagtacaggcaattttgtggttctatgaa
gctgttaagacacttgaagataatattgagacccgattaacattggcttctattcttctt
gaggaagccagagaagatgaagccattttgttgctatctcctccaaaaaatctagatcgc
tttgaagcccaaacaaataaatcggaaccatggtggtgtaatggaaaagtgaaactgaag
ctttgctacatttacagagctaaagggatgctcaaggaatttgtcgatgcaatctatcct
ttggtacatgagtcgttacgtatcgaatctcttcagcaaaaggtgaaagtgaaaaagagg
ctcacaaaaagtgttctgttagaaagagtgaaagtcctggatgatcaccaaacagataac
ctattatgcagatctagaccagtagctcctgcatcagatctgctgaaagctgccagagcg
aagaagttgcttcaaaagaaggcaaaagtaaaggaagaaaagagagctgaggcaatggct
gctggagttgactggcaaagtgatgattcagctgatgatcctccagaagaaatacaccaa
gaacctcccctgccagatcttctcaaggataaagagaatcatggccttgtaatagatttg
tgcaagtcactggcttccttgcatagatattgcgaagcattggagattataaatcttgct
ttgaaatcgactcgcaacatgtgttctgttgcggaggaactccggtctcttggagctcaa
attgcatacaacactccggatcctgagcatggggttgactgtgtaaaatacattgcagac
cagcatccatacagcaatgctgcctggaactgctattacaaagtaattaccagattagat
gactggtatgcgaggcattataagtttctacgtggtaagcgagacaaactcaaagactgt
gcacctccaagtatcatttctgggcatcattttactaaaaagagccgtcatcaagatgct
gcaagagaataccttgaagcttataaattattgccagagaatcccctgattaatctgtgt
gtcggtactgccttaatcaacttggcccttggacacagacttcagaataggcaccagtgt
gttgcacaaggcttagcattcctccacaaaaatttgcagctttgtgaattcagccaagag
gcttttttcaacatagccagggcgtaccatcacgtcggtcttgtgacactggcagcttgg
cactatggcaaagttctggcaatgcatgtgaaggattaccccatcccaaaacttccccat
gaaaagccagagtctgttgaaaatcgattactgggttactgtgaccttcgcagagaagca
gcttttaatttgcatcttatatacaaaaagagtggagcagttgatctcgctcgacaggtc
ttgagagatcactgcactttctga
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