Prunus dulcis (almond): 117637248
Help
Entry
117637248 CDS
T07328
Name
(RefSeq) probable sphingolipid transporter spinster homolog 2 isoform X1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdul02000
]
117637248
Transporters [BR:
pdul02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
117637248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
OATP
MFS_3
Motif
Other DBs
NCBI-GeneID:
117637248
NCBI-ProteinID:
XP_034227980
LinkDB
All DBs
Position
8:8820385..8829900
Genome browser
AA seq
533 aa
AA seq
DB search
MAQKEAKTSEEVKPSAEPAMVIASTAAPAPSWFTPKRLLAIFCVINLLNYVDRGAIASNG
VNGSLGTCTESGVCTSGTGIQGDFNLSNFEDGVLSSAFMVGLLLASPIFASLAKSVSPFR
LIGVGLSVWTFATIGCGFSFNFWSITLCRMLVGVGEASFISLAAPFIDDNAPAPQKTAWL
AIFYMCIPSGYALGYVYGGLVGSHSNWRYAFWGEAILMLPFAILGFVMKPLQLKGFFHPE
STKALTAVETAVSEVQGSDNLNGKDGSFSIKEDLRDSTIQKSSKLKVGTKIMNQISRFMK
DMKVLLVDKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMNDADLIFGGITIVCGILG
TLAGGFVLDYISSTISNAFKLLSAVTLLGGACCFGAFCFKNMYAFLALFAVGELLVFATQ
GPVNYICLHCVKPSMRPLSMAISTVSIHLFGDVPSAPLVGVLQDSINNWRVTALILTSIF
IPAAGIWFIGIFLHSVDRFNEESENQITTTERSNTTPLLKGKKTETTESASEP
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaaagaagcaaagacttctgaagaagttaagccttcggcagagccagccatg
gtcattgcttcaaccgcagctccggctccttcgtggttcacgcccaagaggttacttgct
atcttttgcgtgattaacttgttaaattatgtggaccgaggagcaatagcaagcaatggt
gtcaatgggagcctcggaacttgtacagaaagtggcgtatgcacatccggtaccgggata
cagggggattttaacttgagcaactttgaagatggagttctctcatcagcttttatggtt
ggacttcttttggcttctcctatatttgcatcattagcaaagagtgtaagtccgtttagg
ctcattggagttggattatcagtttggacctttgctacaattggttgtggtttttcattc
aacttctggtccattactctctgccgcatgttagttggtgttggtgaggcttcatttatt
agtcttgcagctccatttattgatgataatgccccagctcctcagaaaactgcgtggctt
gctatattctatatgtgcataccaagtggatatgcacttggctatgtttatggtgggttg
gttggaagtcattccaattggcgttatgctttttggggggaggcaatcctgatgcttcca
tttgctattctaggatttgttatgaagcctttgcagctgaaaggtttttttcatcctgaa
tcaacaaaagcactaacagcagtagagacggctgtctcagaagttcaaggttcagataat
ttgaatggtaaagatggttccttttccattaaggaagatctcagagattctaccatacag
aaatcttctaagctaaaagttgggacaaaaataatgaatcaaatttcaaggtttatgaaa
gatatgaaggtgcttttggttgacaaggtttatgttgttaatgttctaggttatatagca
tacaactttgtcataggtgcgtactcgtattgggggcctaaggctggttataatatatat
catatgaatgatgcagatttgatatttggaggtattacaattgtgtgcggaatattgggc
acactagcaggaggtttcgttctggattatatcagtagcactatctctaatgctttcaag
cttctttcagcagtaacgttacttggaggagcatgttgcttcggtgccttttgcttcaag
aacatgtatgctttcctagctctttttgcagttggggaactacttgtctttgcaactcag
ggccctgtaaattacatttgtctccattgtgttaaacctagtatgaggccactatctatg
gctatttctactgtttcaattcacctttttggggatgtaccttccgcacctcttgttgga
gttctccaggattccattaacaactggagggtgactgctcttattttaacatctattttc
attccagcagcaggaatatggtttataggaatctttctgcacagcgtggatagatttaac
gaagaaagtgagaatcagatcacaacaactgaaaggtcaaacacaacaccattgcttaaa
gggaagaagacagaaacaactgaatctgcctctgaaccctga
DBGET
integrated database retrieval system
