Prunus dulcis (almond): 117637380
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Entry
117637380 CDS
T07328
Name
(RefSeq) F-box protein SKP2A-like isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117637380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdul04121
]
117637380
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117637380
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GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_At5g56370
LRR_Zer-1
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
117637380
NCBI-ProteinID:
XP_034228150
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Position
8:995033..999187
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AA seq
469 aa
AA seq
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MVYCHVAPYTSSILCPDASPLFLLYLLKVLSLSLSVFLFLCFTKSSNRGQNKTSPHTLLI
KNLIQLVTETRSFSFILFKAVDFGLRLDSEMVGKENFKTEDLNLCFEKLMMFGAGSAGAI
ALGGGKVKMEGRAITDWKDIPMELLLQILGLVDDQTVIMASGVCRGWRDAVCLGLTCLSL
SWCTKNMNNLVLSLAPKFTRLQTLILRQDKPQLEDNAVESIANFCHDLQVLDLSKSFKLS
DRSLYALAHGCPNLTKLNISGCTAFSDSALEYLASFCQKMKVLNLCGCVRTASDRALQAI
GRYCSQLQCLNLGWCEDVSDVGVMSLAYGCPDLRTVDLCGCLQITDDSVIALANKCPHLR
SLGLYYCQNITDRAMYSLAQSLVRNKPAAVWESRKPKNDEEGLKTLNISQCTALTPSAVQ
AVCDSFPALHTCSGRHSLIMSGCLNLTSVHCACAVQAHRTASAFPHSAH
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtgtattgccacgtggcaccatacacgtcttcaattctctgcccagacgcttctcct
ctcttccttttatacttattaaaagttctctctctttctctctctgtttttctgtttctc
tgcttcacgaaatcatcaaaccgaggccaaaacaaaacaagcccacatactcttttgatc
aagaaccttattcagctggtgacagaaacgaggagcttttcttttatattgtttaaggcg
gtggattttgggctgagattagattctgaaatggtaggaaaagaaaacttcaagactgaa
gacttgaacttgtgctttgagaaactcatgatgtttggtgctggtagtgctggtgctatt
gcgcttggtggtggaaaagtgaaaatggaaggaagggctattactgattggaaggatatt
cccatggagctcctgttgcaaatccttggacttgtcgatgatcagacggtgatcatggct
tctggagtctgtcgtggctggagagatgctgtttgcttgggccttacctgtctctccctc
tcatggtgcaccaagaacatgaacaacttggtcctatctcttgctcctaagtttacaaga
ttgcagactctaattctacgtcaagataaaccccaacttgaggataatgctgttgagagc
attgcaaacttctgtcatgatctgcaggtcctggacctcagcaaaagcttcaagctcagt
gaccgctccctgtatgccttagctcatgggtgccctaatcttacaaaactcaacattagc
gggtgtacagccttcagtgacagtgctcttgagtatctggctagcttttgccaaaaaatg
aaagttctgaatctttgtggatgtgtcagaactgcatcagacagggcattgcaggctatt
ggtcgttattgcagtcagttgcagtgtctgaatcttggttggtgtgaggatgtaagtgat
gttggagttatgagcttggcatatggatgccctgatctcagaaccgttgatttgtgtggc
tgtctccaaataacagatgacagtgtgattgctttggcaaacaagtgccctcatctgaga
tcccttggcctttattactgtcagaacattacagacagagcaatgtattcattggcccag
agtttagtgaggaacaagcctgcagcagtgtgggaatctaggaaacccaagaatgatgag
gaagggctcaagactctcaacatcagccaatgcacagcactcaccccttctgctgttcag
gcggtgtgcgactcatttcccgcacttcatacctgctctggaaggcattccctcattatg
agcggctgtttgaacttgacttccgtgcattgtgcctgtgctgtccaagcacaccgcacg
gctagcgcctttcctcattcggctcattga
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