Prunus dulcis (almond): 117637552
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Entry
117637552 CDS
T07328
Name
(RefSeq) pre-rRNA 2'-O-ribose RNA methyltransferase-like
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117637552
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117637552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Sugar_tr
Motif
Other DBs
NCBI-GeneID:
117637552
NCBI-ProteinID:
XP_034228351
LinkDB
All DBs
Position
8:10245745..10252255
Genome browser
AA seq
841 aa
AA seq
DB search
MGKVKGKHRLDKYYRLAKEHGYRSRASWKLAQLDTKHQFLHSSHAVLDLCAAPGGWMQVA
VQRVPVGSLVVGVDLVPIAPVRGAFSIQQDITKPECTARLRKLMKENGCSAFDLVLHDGS
PNVGGAWSSEATAQNALVVDSVKLATQLLAPKGTFITKIFRSQDYNAVYYCMKELFEKVE
QDKPAASRSSSAETYLLGFKYKAPAKIDPRLLDVKHLFKSVEPQKKVVDVLRGTKQKRHR
DGYEDGDTILRKASSAADFIWSEAPLDILGSVTSINFEGEASLLIKEHALTTEEVQTLCD
DLRVLGKQDFKHLLKWRVQIRKALSPEKANASTAKEVENEENKEDDEDKILNEMEELTYA
MERKKKRTKKLLSKRRAQDKVRKATGMQIDALQDGYTDNELFSLASIKGKKDLVAVDSTE
YDGENGDLGDSENEESHEQTQEESSSDIDSDEERRRYDAQMEYLLDQAYEQYVSKKEGSA
KQRKRIKQANSEDAQLLEDVDGSDMVQSDYESDKEQGGQEKNPLLEALDDGEGPTQEEIT
NNWFSQDIFAEAVEQGDLDKSDSEDEMQVERQEKPSLVGKAKENNAIQNVKKKIENDAAG
SNHHQVQASKAEDDFEIVPAPGTDSSDDSSSDESEDMDIDKKAEILACAKKMLRKKPREH
MLDDAYNKYMFDDEGLPRWFLDEEKRHRQPIKPVTKEEINAMKAQFKEIDARPVKKLAEA
KARKKRVAFRKLEKIRKKANTISDQADISDRSKRKQIEQMYKKAEPKRPQKEYVVAKKGV
QVRVGKGKVRVDRRMKKDARGSGAGKRPGKGNSKKSKSSGKAQKGKGPGKASAKSGKKGG
R
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggtgaagggcaagcatcgtttggacaaatactaccgcctagccaaagagcat
ggctatcgctctagagcctcatggaagctcgctcagctcgacaccaagcaccagttcctc
cactcctctcacgccgtccttgacctctgcgccgcccccggcggttggatgcaagtcgct
gtgcagcgcgtgcccgttggcagccttgtcgtgggcgtcgacttggtccccatcgccccg
gtccgcggcgccttctcgatccagcaggacatcaccaagcccgagtgcacggccaggctc
cggaagctgatgaaggagaacggctgctcggctttcgatttggtgcttcatgatgggtcg
cctaatgtcggtggggcctggtcttcggaggccactgcgcagaacgctttggttgttgat
tcggtgaagttggctacccagcttttggctcccaaaggcacattcatcaccaaaatcttc
aggtcgcaagattataatgctgtctactattgtatgaaggagttatttgagaaagttgaa
caggataaaccagcagctagtcgtagttcatctgctgagacatatcttttgggttttaag
tacaaggctcctgcaaagattgatccgcgtctacttgatgtgaagcatctatttaaatct
gtagaacctcagaagaaggtggtggatgtactaagaggaacaaagcaaaaaagacaccgt
gatgggtatgaagatggcgacacaattttgagaaaagcatcttcggctgctgactttatt
tggtctgaggcccctcttgatatccttggttccgttacttccataaactttgagggtgag
gcatctttgctcatcaaggagcacgctctaacaacggaagaggttcaaactctctgtgat
gatttgcgtgttttggggaagcaagatttcaagcatcttttgaagtggcgggtgcagatt
agaaaggccttatctcctgagaaggctaatgcttctactgccaaggaagttgaaaatgag
gagaataaggaggatgacgaagacaaaatactcaatgaaatggaggagctgacatatgct
atggagcgcaagaagaaacgtacaaagaagcttctatccaaaagacgagctcaggacaag
gtacggaaggcaacagggatgcaaatagatgcactgcaagatggttatactgacaatgag
ttattttctctcgcttccatcaagggtaagaaagatctggtagccgttgattccactgaa
tatgatggtgagaatggtgacctgggagatagtgaaaatgaggaaagccatgagcaaacc
caagaagaatcatctagtgatatagactctgatgaggaacgcagaagatacgatgcacaa
atggaataccttctcgatcaggcttatgaacagtatgtgtcgaaaaaggagggaagtgca
aagcagaggaagcgtataaaacaagcgaattctgaagacgctcaacttttggaggatgtt
gatggcagtgatatggttcagtctgactatgagtcagacaaggagcagggtggtcaggaa
aagaatcctcttttggaagcacttgatgacggggaagggcctactcaggaagagattaca
aataactggtttagtcaggatatctttgccgaagctgtagagcagggggatttggataag
tctgatagtgaagatgaaatgcaggttgaaaggcaggagaaaccttccttggtaggaaag
gccaaggagaataatgcaattcaaaatgttaagaaaaagattgaaaacgatgctgcaggg
tccaatcaccatcaagtccaagcttcaaaggcagaggacgattttgagatagtaccggct
cctggtacagattcaagtgatgactcatcatcagatgaatcggaggatatggatattgat
aagaaagccgagatactggcatgtgcaaagaaaatgctgaggaaaaagccaagggaacat
atgcttgatgatgcgtataataagtacatgtttgatgatgagggcttgcccaggtggttt
ttggatgaggaaaagaggcaccgccaaccaatcaaacctgtgaccaaagaagagatcaat
gcaatgaaagcgcaatttaaagaaattgatgcccggcctgtgaagaagttggcagaggct
aaagctcgaaagaagcgggttgcctttaggaagcttgagaagattcgtaagaaggcaaac
acgatatcagaccaggcagacatctctgatcgttcaaagaggaagcaaattgaacaaatg
tataagaaggccgagcctaagaggcctcagaaggagtatgtggttgcaaagaaaggagtt
caagtcagggttggcaagggtaaggtacgtgtcgatcgacggatgaaaaaggatgcaagg
ggtagcggggcgggtaaaaggccaggaaaaggcaattcaaagaaaagtaaaagtagtggc
aaggcacagaaaggcaaggggcctggaaaggcttcagcaaagtcaggaaagaagggtggc
agatga
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