Prunus dulcis (almond): 117637874
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Entry
117637874 CDS
T07328
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117637874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117637874
03036 Chromosome and associated proteins [BR:
pdul03036
]
117637874
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117637874
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117637874
PBAF complex
117637874
GBAF(ncBAF) complex
117637874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
117637874
NCBI-ProteinID:
XP_034228815
LinkDB
All DBs
Position
1:complement(37340831..37347274)
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AA seq
802 aa
AA seq
DB search
MPASPSFPSDSRGKWRKRKRDPQIRRGKREDDDEEDDDAVAAAEDNDLEQNDDVSEDPHH
NPQSGAAPDPGPHETEVLDGGVRQSDFPPVVLRTVNRPHSSVLAIVALERANHSGGDAKG
PTSPIVLENVSYGQLQALSAVPADSPALDPDRADGAGSSYVVTPPSIMEGRGVVKRFGNR
VHVVPMHAADWFSPATVHRLERQVVPHFFSGKSSDHTPEIYMQCRNEIVAKYMENPEKRL
AFSDCSRLALAGRLSSDDLTRIIRFLDHWGIINYCAVAPSREPWSGSSYLREELNGEIHV
PSAALKSIDSLIKFDKPRCRLKAADVYSSLPCHDDDDVSDLDNTIRKRLSENHCNHCSCS
LPDVYYQSQKEADVLMCSNCFHEGRFVVGHSSIDFIRVDSTKDYGDTDGENWTDQETLLL
LEAMEMYNENWNEIADHVATKSKAQCILHFLRLPVEDGLLENIEVPGVSMSSNSSDRDGR
GGFHSNSNGDTAGSCPQDVDSENRFPFANSGNPVMSLVAFLASSVGPRVAASCAHAALTV
FSEDNGVSASGSILQMEGSGHRMNPESIHGREGGAHGNIANSLQQKEENTAGHGSRGQNE
AGTIPIPAEKVMAAGKAGLAAAAVKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFA
EVETFLMKECEQVEKTRQRMAGERARLMSARFGPAGVTAPMGLAGLGSSMSNNNTGTGRQ
QIMSPSASQPSISGYSNNQPIHPHMPFVPRQSMLGLGPRMPLTSIQSSSSAPNAMFNAAG
TAQPTLNHPMLRPVPGTSSGLG
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctccttcattcccttcagactcccgcggcaaatggaggaagcgaaagcgc
gacccccaaattcgcagaggcaaacgtgaggacgacgacgaagaagacgacgacgcggtt
gctgccgcagaagacaacgacctcgaacagaacgatgacgtttcagaggatccccaccat
aacccccaatccggtgccgcaccggatcccggccctcacgagaccgaggtcctcgacggt
ggggtccgccaaagcgacttccctcccgtcgttttgcgcaccgtgaacaggccccactcg
tccgttcttgcaattgtggcgctcgagcgagccaatcacagcggcggggacgccaagggc
cccaccagcccgattgtcttagagaatgtgtcgtatggtcagctccaggcgttgtccgcg
gtgcccgccgatagtccggcgttggatccggaccgtgcagatggtgccgggtcgtcttac
gtggtcactccgccgtcgattatggaaggccgtggcgttgttaagcggtttgggaacaga
gttcatgtggttccaatgcacgcagcagattggttttcaccagccacagtgcatcgacta
gagagacaagtggtaccgcattttttctcaggaaaatcatcagatcatactcctgagata
tacatgcaatgtaggaatgaaattgttgctaaatacatggaaaatccagagaagagactt
gcattttctgattgcagtagattagcattagcaggtcgtctaagttctgatgatttgact
cgaataattcgttttctggatcactggggaattatcaattactgtgcagtagcaccgagt
cgagagccttggagtggcagttcctacttaagggaggagctaaatggtgaaattcatgtg
ccatcagctgctctaaaatccattgatagtttaatcaaatttgacaagcccagatgtagg
cttaaggcagctgatgtttattcgtctttgccatgtcatgatgatgatgatgtctctgat
ttggacaacacaattcggaagcgtctatcggaaaatcattgcaatcattgttcttgttct
cttcccgatgtatactatcagtcacagaaggaggctgatgtacttatgtgctctaattgc
ttccatgagggaagatttgtggttggtcattcaagcatagatttcatacgggtggattca
acaaaagattatggtgatacagatggggagaattggactgatcaagaaacccttctgctg
cttgaggcaatggaaatgtacaatgagaactggaatgaaattgcagaccatgttgctaca
aagtcaaaagcgcaatgcatccttcatttccttcgtttgcctgtggaggatggcctgctg
gaaaatattgaagttccaggcgtgtccatgtcttccaactcgtcagatagagatggtcgt
ggaggatttcattcaaactcaaatggggatacggcaggatcctgcccacaagatgttgat
tctgaaaacaggttcccatttgcgaattctgggaatccagtcatgtccctggttgcattt
ctggcctcttctgttgggccaagagttgccgcatcttgtgcccatgcagcattgacggta
ttttctgaggacaatggtgtatctgcttctggaagtattttgcagatggaaggatcagga
cataggatgaaccccgagagcatacatggtagagaaggtggtgctcacggaaatattgca
aattcacttcagcagaaggaagagaacacagcaggacatggttctaggggtcaaaatgag
gcagggacaattccaatacctgcagaaaaagttatggctgctggcaaagctggccttgct
gctgctgcagtaaaggcaaaattatttgctgatcatgaagaacgggaaattcagagacta
tctgctaatatcataaatcatcagttgaagagattggagctgaagttaaagcagtttgca
gaagtggaaacttttctaatgaaagaatgcgaacaagtggagaagactaggcagaggatg
gctggtgaacgtgcccgtcttatgtcagctcggtttggacctgctggagtcactgcacct
atgggtttagcaggtcttggttcttccatgtctaataataacactggtaccggtaggcaa
caaataatgtcaccttcagcttcacagccaagtatatcaggatacagcaacaaccaacca
atccatccccacatgccatttgtgccacgccaatcaatgttagggttggggccgaggatg
cccttgacatctatacagtcatcctcatcagctccaaatgccatgtttaatgctgcaggg
actgcccagccgactctaaatcatccaatgttgaggcctgtaccaggtactagctctggt
ctaggttga
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