Prunus dulcis (almond): 117638083
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Entry
117638083 CDS
T07328
Name
(RefSeq) nijmegen breakage syndrome 1 protein isoform X1
KO
K10867
nibrin
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117638083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdul03032
]
117638083
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117638083
DNA replication proteins [BR:
pdul03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
117638083
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
117638083
BRCA1-C complex
117638083
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Yop-YscD_cpl
Nbs1_C
Motif
Other DBs
NCBI-GeneID:
117638083
NCBI-ProteinID:
XP_034229063
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Position
8:20242676..20249033
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AA seq
517 aa
AA seq
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MVWGFFPDDPHSGEDKFYIFARGTYKVGRKGCDVNITKDKGVSRVHAEIVVDAMISAPLH
TKSSILSSKVRIRDCSKYGTFINKNLTSMEKIHELPNKETSLREGDLVSFGTGNAIYRFS
FVPLIFFACCSDPTQVNHALEDKLSSFGAHITYHLSQECTHVLVDQLMPVKEDMLDAIVA
KKTFVLGSWVEFLAEKNIRTELPSCESFAPTLTFEGVSVKLADPRTRENCLEGYTFLLDS
KPVYKFMNRLRSLLEVSGAKILTIDAFNLNSQSSDCGENDRVVCVIPEQSSDDWFNKLGS
LLRVNETGLISAILNGRLDPAMLKSPCVVVSSSCSTDETVVADSDTEEIATSVLATASLG
TKGVVENVPHEISTNYAAPKSEDNYVMSCRRSSDISTVRGKLDESESGNVDIIYSQDLIV
RDASIPCTVATTANHRVVNFKRFRKPNIQSGNSFNNIIPFLKYPYKDSDYGGEEVLESVK
EEKRRKQMEAVSEELFNNEGRSRRGAAGSIRGILSHG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggtttcttccccgatgaccctcactcaggtgaagataagttctatatcttc
gcaaggggaacgtacaaagtgggtcggaaaggttgtgatgtaaatattactaaagataaa
ggagtttctcgggtccatgcggaaatagttgttgatgcaatgatttctgcccccctgcat
acaaaatcttctattctatcttcaaaagttcgaattagagattgctcaaagtatggaaca
tttattaacaagaaccttacatcgatggaaaagattcatgagttaccgaataaagaaaca
tcactaagagaaggggacttggtttcatttggtactggcaatgcaatctacagattttcc
tttgttccactcattttctttgcgtgctgctcggatccaacccaagtgaatcatgccctt
gaagataaactttcatcatttggtgctcatatcacttatcatctgagtcaggagtgcaca
catgtgcttgttgaccaactcatgccagtaaaagaagatatgctggatgctattgtggcg
aagaaaacttttgttcttggtagttgggttgagttccttgcagaaaaaaacattcgcaca
gagcttcctagttgtgaatcctttgctccaacactaacatttgaaggagtatcagtcaaa
cttgcagacccgagaactcgtgagaactgtttggaagggtacacctttttgttggactca
aaacctgtgtataaattcatgaatcgcttgcggtccttactggaagtgagtggtgcgaag
attcttacgattgatgcgtttaatttgaatagccaaagctcagattgcggagaaaatgat
cgtgttgtatgtgttatcccggaacaatcgtcagatgattggttcaataagcttggttca
ctattaagagtgaatgagactggcttaatatctgccattttaaatggacggctggatcca
gctatgttaaagtcaccttgtgtagttgtatcatcttcatgctccacagatgaaaccgtg
gtagctgattctgatacggaagaaatagccacttcagttttggcaactgcatctcttggc
accaaaggagttgttgaaaatgtaccccatgaaatctccacgaattatgcagctcctaaa
tccgaggataactatgtcatgagctgtcgacgcagtagtgacatatccaccgtaagaggc
aagcttgatgaatctgaaagtggaaatgtagatattatttatagccaagatttgattgtg
cgagatgcaagcataccttgtaccgttgctactactgcaaaccacagagttgtaaatttc
aaacgcttcagaaagccaaatattcaatctgggaatagcttcaacaatattattccattc
ttaaagtacccatataaagattctgactatgggggtgaggaagtgctagagtctgtgaaa
gaagagaaaaggagaaagcaaatggaagccgtttctgaagaattatttaataatgaaggg
aggagtcgtcgtggcgcagctggttctattcgtgggattcttagtcatggttaa
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