Prunus dulcis (almond): 117638792
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Entry
117638792 CDS
T07328
Name
(RefSeq) uncharacterized protein LOC117638792 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117638792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117638792
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117638792
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
117638792
NCBI-ProteinID:
XP_034229804
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Position
8:14569445..14588087
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AA seq
1968 aa
AA seq
DB search
MASPKSVDASLWWDPFSVLLTELENASLSSDLPPNLVKKLKDNHAWFVDTLSHFKPPNEN
SREALNSQQVKIGSHQLDIKPELKDKALKISSYLCLDEVQSYILVERSFKNNNVALDSIV
HEYFHAVCIDYYIERQYLLKCTRRILAHALSLGSVSGEGNAMKEEALKLISDGLERKLLS
VLQDLLSSNHPEQMDIDLFTLWAEETLVEDNLVLDILFLVYNESVCTCNGERWKTLCWLY
KGILSGSYNFRKLAVSTEALRSAYQAKVQLLLILIETLDLENILQMVHDEIPFREGKSVF
TLADVQEMEAIISTFNVFETKEAGPLILAWAVFLCLISSLPGKEENNVVMEIDHGGYVRQ
AFEAASLTYLVEFLQSDVLKESDGPVAGYRSVLRTFISTFIASYEIGPQLEDSALKLIVD
ILCKIYQGEESLCIQFWDRESFIDEPIRCLLCSLEGEFPFRTVELVRLLSSLCEGTWPAE
CVFNFLDKSVKISSLVEINNSSSVDDISTIVETHVPLHVPGFEGLVIPSRTCGHVLRSVG
GNAAVVQWEYTQSEVLVLLMRLAEELYFERNDEVLLILDLISRMVTFNTAVCFALMDIGS
SLHFQSTGMSWQIGSNMWLVEIICTLIRKSSPTSDGATLMSLGINILAKMLKCYPSHVAE
VALKANIFDFSNGHDDSSSGSWLLSGKMAKMLLIDCEQNDGDCSLPISVLDFTVHLMDTG
LKNDAVLALIVFCIQYVLVNHEYWKYKVKHTRWRVTLKVLEVMKKCITSISCSEKLDEVI
LDRLLSDSSIHSTLFRIVCTTTEALERLYISWHPTEIEGFEMAICSVLDILFIILSKFSK
DISSSPPFFHQAVFSSATKPIPVVAALVSLISYFRNPGIQVGAARVLSAFLMMADLMQPY
LFGSSFGLDDKQIGDLRQCVSYILLEQSEWNEDLFVAVVNLLTSAARYQPAFLVAVLSTE
VKRDVQQSNAGHVKLPTNDVTFRSSECEKTSIVDAVLYQIERSNDLINSNPRILLNVLNF
LRALWQGAAQYTNILECLKSSENFWKKLSSFISVISSVEAPSPENITETEAQDLAFRYQC
QSAILEIMAHDMFLHKKLLHLETLAKQVPESQDRIQNTVRLEKSKASDLVDILSAWCRSS
VLDNLTKSLSYCEYDLKLYLRAKVAASVITAHVMVNLANGDAGSVSVALLEKSSILSNKF
RSLPAFSELLAQYSQHGYSAGKEPNYLILSDLYYHLQGELEGREVSAGPFKELSLFLIES
NVFQIYQHKYDADLFVTGKDAYLFDLKRVRADLGLDLWDYSKWKASKATAETMLNHMKAA
NSMALLTSSKLSALRALRSVLTVYTDDSLETKSTAKEISDQLVFSCINHICQSFHDTVES
LASLPGAPEDIFHYLSAQAELLLYLMMYAHKSLPLSVCILVLKTSGSGLKVLSDFRALVT
GPAVMGVNTTVKLLLMLLLSAVEFSCRKSHLVGARDIISVEDLAKISNVSLGLLPILCNC
MAIVEHGTLSLTTMDLILRNFLTPNTWFPIIQNHLQLQHLILKLQDKNSLDSVPIIMKFF
LTVARVRQGAEMLINYGFLSSLRLLFAEYLEGRSSSVSTNKRNPNSTEKTEKPQQIWGLG
LAVITAMVQSLGDSSACSDVVENVIPYIFSEKAYMISYYLSAPDFPSDGHDKKRPRAQQR
QTSLTDLKETEHTLMLMCVLAKHWNSWVKAMKEMDSQLREKSIHLLAFVSRGTQRLGESS
SLNAPLVCPPILKEEFDGCKKPSFVNSRSGWFALSPLSCVSKPKFSAVSTTTALAIKTQS
TENSDHVSQSYFSDTIALQIYRITFLLLKFLCLQAEGAARRAEEVGFVDLDHFPELPMPE
ILHGLQDQAINIVTELCGDKRSNEIQIEVQSICCLLLQIMEMALHLELCVLQICGIRPVL
GRVEDFSKEVKLLIKAMERHAFLKSSVKSLKQITSVIYPGLLQAEEFL
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggccagccctaagtccgtcgacgcctctctgtggtgggaccctttctctgttttactc
actgagctcgaaaatgcgtctctctcttccgacctccctcccaatttggtaaagaaattg
aaggacaatcatgcttggtttgtggacacattgtctcacttcaagccgcccaatgagaat
tcaagagaggctttgaattcacagcaagtgaaaatcgggtctcaccagttggatataaaa
cctgaattgaaagataaggctttgaaaatcagctcttatttgtgtctagatgaggtgcaa
tcgtacattcttgttgagaggtctttcaagaacaacaacgtagctcttgactctatagtt
cacgagtattttcacgcggtatgtattgactattacattgagcgacagtacctgctgaaa
tgtaccaggagaattctcgcacatgctttgtctttaggaagtgtctctggagaaggtaat
gctatgaaggaggaggcgctaaagttgatttctgatggattggagaggaagctgttatcc
gtgctgcaagaccttttatcctctaatcaccctgaacaaatggatattgaccttttcact
ttgtgggctgaggagacactagttgaagacaatttagttttggacattcttttccttgtt
tataatgagtcagtttgtacttgtaatggtgaaaggtggaaaacattgtgctggctatat
aagggaattctatctgggtcttataactttagaaagttggcagtatcaactgaagcacta
cgttctgcttatcaagccaaagttcagctgcttctaatccttatagaaaccttggacctg
gaaaatattctccaaatggttcacgatgaaatccctttcagggaaggcaaatccgttttt
actttggctgatgtccaagagatggaagcaataatttcaactttcaatgtttttgaaaca
aaagaagcaggcccattaattctagcatgggctgtgtttctttgtctgatttcatcactt
ccaggcaaagaagaaaacaatgtagtaatggaaattgaccatggtggttatgttcgtcaa
gccttcgaggctgcatctttgacttatcttgtagaattccttcaaagtgatgtattgaag
gaatctgatgggcctgttgctggttatcgaagtgtgttgagaacctttatttctacattt
attgcatcttatgagattggtcctcagctggaagatagtgctcttaagttaatagtggat
attctttgcaaaatttatcagggagaggagtcactttgtatccagttttgggatcgtgaa
agttttattgatgagcctatccggtgtcttctttgcagcttagagggtgaatttcctttc
aggactgtggaactagttcgccttttatcatctctttgtgaaggaacttggcctgcagaa
tgtgtgtttaactttctagataagtctgttaagatatcatccttggttgagattaataat
agttcctctgtggatgacatctccacaattgttgagacgcacgtcccattgcatgttcct
ggatttgaaggtttagtcattcccagtagaacttgtggacatgttttaagatcagttggt
ggaaatgctgctgttgtccaatgggagtatacacaatctgaggtgctagtattgctcatg
cgcctggctgaggagctgtattttgagagaaatgatgaagttcttcttatccttgatctg
attagccggatggttacctttaacacggctgtatgttttgctttgatggacattgggagc
tcattgcatttccaatcaactggcatgagttggcagataggaagtaatatgtggttggtt
gagatcatttgcactttaatcagaaaatcatctcctacttccgatggtgccactctgatg
tcattgggtataaatattttggcaaaaatgttaaaatgttacccttctcatgttgctgag
gtggctttaaaggcaaatatatttgatttcagcaatggtcacgatgattcgtcaagtgga
tcatggttgctttctggaaaaatggcaaagatgctattaattgactgtgagcagaatgat
ggtgactgctcattgcctatatcagtgctggacttcactgtacatctcatggacacagga
ctgaaaaatgatgctgtcttggctttaattgttttctgtattcagtatgttcttgttaac
catgaatactggaaatacaaggtgaaacatactcgttggagagtaacattgaaggtgctg
gaagtgatgaaaaaatgtattacatcaatatcatgctctgaaaagttggatgaagtcatc
ttggataggttactgtctgattcttccatccatagtactctctttcggattgtttgtaca
actacagaagcattagagagactttatatcagctggcatccgacagagattgaaggtttt
gagatggctatatgttctgttttagatattcttttcataatcctctccaaattttctaag
gatatatcttccagtcctccattttttcaccaagcagtcttctcatctgcaacaaaacca
attcctgtagttgcagcgcttgtctccttgatatcttactttcgcaatcctggaatacaa
gttggtgctgctagggttttatcagcgttcttgatgatggcagatttaatgcaaccatat
ttgtttggtagcagctttggtctggatgataagcagattggagatctgaggcagtgtgtt
agttacatactacttgagcagtcggaatggaatgaagatctctttgttgctgtagtcaat
ctcctcacttctgctgctcgttatcagcctgcttttcttgttgctgtattatccaccgaa
gtgaaaagggatgttcaacagagtaatgctggtcatgtgaagctgccaacaaatgatgtt
accttcaggtcatctgagtgtgaaaaaacaagtattgtggatgcagttctgtatcaaatt
gaaagatctaatgatcttatcaacagcaatccccgaatactgctgaatgttctcaacttt
ctaagggcactgtggcaaggtgctgctcagtacactaatattttggaatgcctgaaaagc
tccgaaaatttctggaaaaaattgtccagttttatttcagtaatttctagtgtagaagct
ccttcacctgaaaatataactgagacagaggctcaagatttggctttcagatatcagtgt
caatctgccatattggaaataatggcacatgacatgtttctgcacaaaaagctattacat
ttggagacacttgcaaaacaagtgcctgaatcacaagacaggatacaaaatacagtaaga
ttagaaaaatcaaaagcttcagatctggtggatattttatcagcctggtgcaggagctct
gttttggataatcttaccaagtcactttcttattgtgaatatgacctcaagttgtattta
cgggcaaaggttgctgcaagtgtaatcactgcccatgtgatggtgaacttagcaaatggt
gatgcaggaagtgtgtctgtggcattacttgagaagtccagcatcctgtcaaataagttc
agaagtcttcctgctttttctgaattgttagctcaatactcacagcatggttacagtgca
gggaaggagccaaactatttgattctcagtgatctttattatcatctacaaggagagctt
gaaggccgtgaagtcagtgctggaccattcaaagaactctctctgttccttatagaatca
aatgtttttcagatttaccaacataaatatgatgctgatctttttgtaaccggaaaagat
gcatacttgtttgatcttaaacgtgtacgagctgatttggggttagatctttgggattat
tcaaagtggaaggcatcaaaggcgactgcagaaacaatgttgaatcacatgaaggctgca
aactcaatggcgttgcttacaagttcaaagctttctgcactaagagcattaagaagtgtc
ttgactgtgtacacggatgattcactggagacgaaaagtacagcgaaagagatctctgat
caacttgttttctcatgcatcaatcacatatgccagagcttccatgacacagtagaatca
ttggcttcattacctggtgctcctgaagatatctttcactacctttcagcgcaagcagag
ttgcttctctatcttatgatgtatgcacataaaagcctgcctttgtctgtttgcattctt
gtactaaaaacatcaggttctggccttaaagtgttgagtgatttcagagcattagttacc
gggccagcagttatgggggttaacactaccgtaaagctcttgcttatgttgcttctctcg
gcggtggagtttagttgtcgtaagtcacatttggttggggcaagagatataatatctgtt
gaagacctggctaaaatatctaacgtgagtcttggtctactaccaattctctgtaactgt
atggctattgttgagcatggcaccctctccctaactactatggacttgatactgagaaat
ttcttaactcccaacacttggttccccattatacaaaatcacctccagcttcagcatctt
attctgaagcttcaagataagaactcacttgactctgtgcccattataatgaagttcttt
ttgactgttgcccgtgtgaggcagggtgcagaaatgcttattaattatgggtttctttcg
tctctgagactcttgttcgctgagtacttggaaggtaggtcttcttccgttagtactaat
aagagaaatcccaactcaactgaaaaaactgagaagcctcagcaaatttggggacttggt
ttggcagtcatcacagctatggttcagtctttaggagacagttctgcttgttctgatgtt
gtggagaatgtaataccctacatcttttcagagaaagcctatatgatttcttactatctc
agtgccccagacttcccatctgatggtcatgacaagaaaagacctcgggctcagcagaga
caaacttctcttactgatcttaaagaaactgagcacactctcatgctgatgtgcgtgcta
gcaaaacattggaattcatgggttaaggccatgaaagaaatggactcccagctgagagag
aaaagtatccatcttttggcctttgtcagccggggaactcaacgccttggagaatcttcg
agtcttaatgctcctcttgtatgccctcctatccttaaagaggaattcgatggctgcaag
aaaccctcatttgttaacagtagaagcggatggtttgctctttcaccgctcagttgtgtg
tcaaaaccaaaattttcggctgtctctacgacaactgcgctggctattaaaactcaatca
actgaaaatagtgatcacgtatctcagtcatacttctccgacactattgcccttcagata
tacagaattacttttcttcttttgaagttcctctgtttacaagctgagggtgctgctaga
agggcagaggaggtggggtttgttgatcttgaccattttcctgagcttccaatgcctgaa
atcttgcatggcttacaagatcaagcaattaacattgttacagagctgtgtggggataaa
agatcaaatgagattcaaattgaagtgcagagtatctgttgcttattgctacaaataatg
gagatggccttgcacttggaactttgtgttctacaaatatgcggcataagacctgtgtta
gggcgtgtggaagatttttcaaaggaagttaaactgttaataaaagcgatggagagacat
gctttcctcaaatcatctgtgaagtccttgaaacaaataacgtcggttatctatcccgga
ttgttacaggccgaagagtttttgtga
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