Pseudoalteromonas distincta: FFU37_01340
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Entry
FFU37_01340 CDS
T08139
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pdv
Pseudoalteromonas distincta
Pathway
pdv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FFU37_01340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdv03019
]
FFU37_01340
03009 Ribosome biogenesis [BR:
pdv03009
]
FFU37_01340
Messenger RNA biogenesis [BR:
pdv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FFU37_01340
Ribosome biogenesis [BR:
pdv03009
]
Eukaryotic type
Pre-60S particles
RNases
FFU37_01340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QCU73187
UniProt:
F3BQC0
LinkDB
All DBs
Position
L1:321574..322119
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AA seq
181 aa
AA seq
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MTINKSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQSDELLNGMDE
WCTTQHGKSGLTARCKASTFDEEYAVAQTLDFLKQWVPAGVSPMCGNSIGQDRRFMNKYM
RELEDFFHYRNLDVSTIKELARRWKPEVLAKVNKKGSHLALDDIKDSIMELKVYRENFFN
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgactattaataaatcaaatttaatttggctcgatcttgaaatgacaggactcgaacca
gagaccgataaaatactcgaaattgcgacggttgtcactgacgcagacctgaatatatta
gctgaagggccaaccatagctattcatcaaagtgatgaattactaaatggtatggacgag
tggtgtactacgcagcatggtaagtcgggtttaacagcgcgctgtaaagcaagtacattc
gatgaagagtatgccgtggcacaaacgttagattttttaaaacagtgggtgcctgcaggt
gtatcaccaatgtgtggtaattcaattgggcaagaccgccgctttatgaataaatacatg
cgtgaacttgaagatttttttcattaccgcaatcttgacgtgagtactattaaagaatta
gcacgtcgttggaaacctgaagtgcttgcaaaagtgaacaaaaaaggttcgcaccttgct
ttggatgacattaaagattcgattatggaattaaaagtctatagagaaaatttctttaat
ttgtaa
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