Pseudoalteromonas distincta: FFU37_03985
Help
Entry
FFU37_03985 CDS
T08139
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pdv
Pseudoalteromonas distincta
Pathway
pdv03030
DNA replication
pdv03430
Mismatch repair
pdv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFU37_03985 (dnaE)
03430 Mismatch repair
FFU37_03985 (dnaE)
03440 Homologous recombination
FFU37_03985 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdv03032
]
FFU37_03985 (dnaE)
03400 DNA repair and recombination proteins [BR:
pdv03400
]
FFU37_03985 (dnaE)
Enzymes [BR:
pdv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFU37_03985 (dnaE)
DNA replication proteins [BR:
pdv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFU37_03985 (dnaE)
DNA repair and recombination proteins [BR:
pdv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFU37_03985 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QCU73681
UniProt:
A0A4P9IYU8
LinkDB
All DBs
Position
L1:901770..905261
Genome browser
AA seq
1163 aa
AA seq
DB search
MAAPDFVHLRVHSDFSMVDGLAKTKPIVAKAQELQMPAIAITDQMNFCGLVRFYGATHNA
GIKPIVGADFWVRSPEFPDEPSRLTILAKDNDGYKNITLLISKAYQRGHVFHRPVIDREW
LVELKAGLIILSGAKDGDLGKALLKNNPTVIESVVSFYKQHFSDNYYLELVRTNRPLEED
YLHMAVELAAKEQLPVVATNEVVFLKPENFEAHEIRVAIFDGYTLDDKRRPKRFSEEQYL
KTPEQMAELFSDIPEALQNTVEIAKRCNVTVQLGTYFLPDYPTGSLKIEDFLVKVSQDGL
EERLQFLFPDEEDRKVKRVEYDERLAIELGVINQMGFPGYFLIVMEFIQWSKDNNIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSA
LYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPGDPGMTLAKAFDVEPR
LQEAYDGDNEVKDLIDMCRILEGCTRNAGKHAGGVVISPTTITDFAALYCDDEGKFPVTQ
FDKNDVETAGLVKFDFLGLRTLTILQWAVDMTNVRMKRQGKDPVDINTIPLDDKKSIELL
LRAETTAVFQLESRGMKDLVRRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKLGREE
ISYPDAQYQHESLKPILDPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSTFEDGARNNGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHHPA
EFMAAVMSADMDNTDKIVILVDECENMKLTLLPPDVNAGEFKFTVNLEGEIVYGIGAIKG
VGEAPVEAILEARAKGGPFKDLFDFCARVDLKRLNKRVTEKLIYAGALDQLGPEKTQSGR
ATLLASLKDAMRAADQHNKAEQLGQSDLFGLLATEPDEVEQAFIKATGLTDNEWLDGEKE
TLGLYLTGHPINQYRRELRHYTSGKIVDLQPTNRDVFATAAGLVIASRVLINKKGNRWAL
VTLDDKSARIDVRLYSDEFEKYQDMLQVNNILVISGQVSFDNFSGGITMTAREINTIAQA
REKRIKAIKMTLNMVQIEAGFFDKLQKVLEPYKMGTCPIKVYYQRPDALAQLTLGIEWCV
TPSDDLIHKLSLMAAQDVELEFN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcctgattttgttcatttaagagttcattcagacttttcgatggttgatggc
cttgctaaaacaaagccaatagtcgcaaaagcgcaagagctgcaaatgccagccattgca
attactgatcaaatgaacttttgtggtttagtgcgtttttatggcgccacgcataatgca
ggtattaaacctatagtgggtgctgacttttgggttcgtagcccagagtttcctgatgag
ccaagccgcttaaccatattagccaaagacaacgacggctataaaaatattaccttgctg
atatctaaagcgtaccaacgagggcatgtatttcatcgccctgtgattgaccgcgaatgg
ttagttgagctaaaagcaggcttaattattctctcgggcgctaaagacggtgacttaggt
aaagcgttattaaaaaataatccgactgtaattgaatcggttgttagtttttataagcag
cattttagcgataactactacctagagcttgttcgcaccaatcgtccgcttgaagaagat
tacttgcacatggcggtagagcttgctgctaaagagcaactaccggttgtagccaccaat
gaagtggtgtttttaaagccagaaaactttgaagcgcacgaaattcgtgttgctattttt
gacggttacacgctcgatgataagcgccgccctaaacgattctctgaagaacaatatcta
aaaacacctgagcaaatggctgagttgtttagcgatattccagaagccctacaaaatacc
gtagaaatcgctaagcgttgtaatgtaactgtgcaattaggtacttactttttacctgat
tacccaaccggctcgcttaaaattgaagactttttagttaaagtgtcacaagacggccta
gaagagcgactacagtttttattccccgacgaagaagatagaaaagtaaaacgtgttgaa
tacgatgagcgtcttgcaattgagctcggtgtaatcaaccaaatgggattcccaggttac
ttcttaatcgtaatggaatttattcagtggagtaaagataataatattccagttggacct
ggtcgtggttcaggtgcgggttcgttagttgcgtacgcgcttaaaattaccgaccttgat
ccacttgagtttgacttactctttgagcgattcttaaaccctgaacgtgtatcaatgccg
gatttcgacgtcgatttttgtatggatagacgagacgaagtaattgatcacgtgtcggct
ttgtatggtcgagatgcggtttcgcaaattattacctttgggaccatggctgcaaaagcg
gtaatacgcgatgtagggcgagtgcttggccatccttacgggtttgttgatcgaatttca
aaattgattccgggtgaccccggtatgacacttgccaaagcgtttgatgtagaaccgcgc
ttgcaagaagcctacgatggcgacaatgaagtaaaagatttaatcgacatgtgtcgcatc
cttgaagggtgtacacgtaatgccggtaaacatgcgggtggcgtagtaatatcgccaacc
actattaccgacttcgctgcgctttattgcgatgatgaaggtaagtttccagtaacacag
tttgataaaaacgatgtagaaacagccggcttagttaagttcgatttcttgggtttacgt
acactgactatattgcagtgggcggtcgatatgaccaatgtgcgcatgaagcgccaaggt
aaagaccccgttgatataaacaccattccactggatgataaaaaaagtattgagttgcta
cttcgagccgaaacgactgctgtatttcagctagagtcgcgtggtatgaaagacttagta
cgccgccttaagcccgactgctttgaagatatgattgcacttgtggccttgttccgccca
ggtccgctgcaatcaggcatggtagataactttatcgaccgaaaactgggccgagaagaa
atctcatacccagatgcgcagtatcagcacgaaagcttaaaaccaatacttgatccaacc
tacggcattattttgtatcaagaacaagtaatgcaaattgcgcaagtactagcaggttac
acgctaggtggcgccgacatgctgcgtcgtgcaatgggtaagaaaaagcccgaagaaatg
gcaaagcagcgttcaacatttgaagatggcgcaagaaataacggcattgacggcgagctt
gcgataaaaatcttcgacttggtagaaaagttcgcaggttacggttttaacaaatctcac
tcagcagcttacgcactcgtatcgtatcaaacattgtggatgaaaactcatcatcctgca
gagtttatggctgcggtaatgtcggccgatatggataacaccgacaaaatagttattttg
gtggatgaatgtgaaaacatgaagctcaccttattaccaccagacgtaaatgcaggtgag
tttaagtttacagtaaaccttgaaggtgaaattgtttacggcattggcgcgataaaaggc
gtgggtgaggcaccggttgaagcaatcctagaagcgcgtgcaaaaggcggcccatttaaa
gatttatttgatttttgtgcccgcgttgatttaaaacgcttaaataaacgtgttactgaa
aaattaatttacgcaggtgctttggatcaattaggaccagagaaaacccaatctgggcgt
gctacattactagccagtttaaaagatgctatgcgtgcggccgatcaacacaacaaagct
gagcaattaggacaaagtgacttatttggtttattagccactgagcctgatgaagttgaa
caagcttttattaaagccacagggcttactgataacgagtggttagatggcgaaaaagag
acgctaggcctttatttaactgggcatccaataaatcagtaccgccgtgagcttaggcat
tacactagcggaaaaatagttgatttacagccaacgaaccgtgatgtgtttgcaacggca
gctggtttagttattgcttctagggtattaattaataaaaaaggaaatcgttgggcctta
gtaactttagatgacaagagtgcacggattgatgtacgcttgtattcagacgagtttgaa
aagtaccaagatatgctccaagttaacaatatcttggtaatatctggacaggtcagcttt
gataacttctccggtggtattacaatgaccgccagagaaataaacaccattgctcaagcg
cgtgaaaagcgtattaaagcgattaaaatgacgctgaacatggtgcaaatcgaggcaggt
ttcttcgataaattacaaaaagtactcgaaccctataaaatgggaacgtgtccgatcaag
gtttattaccaacgtccagatgcgttggcgcaattaactcttgggatcgaatggtgtgtt
acgccaagtgacgacttaatccataagttatcactaatggctgcgcaagatgtagaacta
gaatttaactaa
DBGET
integrated database retrieval system
