Pseudoalteromonas distincta: FFU37_05865
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Entry
FFU37_05865 CDS
T08139
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pdv
Pseudoalteromonas distincta
Brite
KEGG Orthology (KO) [BR:
pdv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdv03032
]
FFU37_05865 (topA)
03400 DNA repair and recombination proteins [BR:
pdv03400
]
FFU37_05865 (topA)
Enzymes [BR:
pdv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FFU37_05865 (topA)
DNA replication proteins [BR:
pdv03032
]
Prokaryotic type
DNA Topoisomerases
FFU37_05865 (topA)
DNA repair and recombination proteins [BR:
pdv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FFU37_05865 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
QCU74013
UniProt:
A0A4P9IZZ1
LinkDB
All DBs
Position
L1:1317527..1320235
Genome browser
AA seq
902 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNDFIVKSSIGHVRDLPTSGSSKAKVPATKTPAEVRKME
PEEKAAYKKQRDYTNLVARMGIDPEQGWEPHYEILPGKEKVVQELQKLAENADQIYLATD
LDREGEAIAWHLQEIIGGEPEKYKRVVFNEITKNAIQQAFETPGELNTDMVYAQQTRRFL
DRVVGFMVSPLLWAKVARGLSAGRVQSVAVRLLVEREREIKAFIPEEFWDIHADVKNTES
ELRLEVTKQAGKAFKPVNEAQASAAVKSLESAEYKVISVEEKPSKSRPSAPLITSTMQQA
ASTRLGYGVKKTMMLAQRLYEGGYITYMRTDSTNLSKDAVEMCREYVTNEFGAKYLPKDP
INYSSKGNAQEAHEAIRPSSVTVLSGHIEGVDADAKKLYELIWRQFVACQMVPAEYDLTT
LTVAANDFQLKAKGRVLRFDGWTKVQPAVRKKNEEDQSLPAVKEGEILTLIELDPKQHFT
KPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFFAEKMGEIVTDRLV
ENFTDLMNFDFTAKMEGRLDDIAEGERVWTQVLDKFYADFSTQLTVAKDEPENGGMRLNE
MVETDIECPTCSRKMGIRTASTGVFLGCTGYSLPPKERCTTTMNLVSGDEAVAADVEDVE
TEKLMQMKRCPICETAMDSYLIDETRKLHVCGNNPACKGHIVEEGTFKIKGYDGPIIECD
KCGSDMELKSGRFGKYFGCNNDECKNTRKLLKNGEAAPPKEDPVHITELECEKSDAYFVL
RDGAAGIFLAANTFPKSRETRAPKVEELKRFRDRISPKFYYLADAPAKDPDGNLAVVRYS
RKNKSQYVMTEVDGKATGWTAHYEAGKWTEEAKKKAAPKKKAAAKKAPAKAKPKAKAKKE
DE
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctagtaattgtagagtcacctgctaaggctaaaacaattaataaatat
ttaggtaatgacttcatcgtaaagtccagtattgggcatgtacgtgatttacctacttca
ggttcgagcaaagctaaagtgccggcaactaaaacgccagcagaagttcgcaaaatggaa
cctgaagagaaagcagcgtataaaaagcaacgagattatactaacctggtcgcgcgtatg
ggtattgatcctgagcaaggttgggagccgcattatgaaatcctgccaggtaaagagaag
gttgttcaagaattacaaaagctggctgaaaatgcagatcaaatatacctcgcaacggat
ttggatagagaaggggaagcaattgcttggcaccttcaagaaatcattggcggcgaacct
gaaaagtataagcgcgtagtttttaacgagattaccaaaaacgcaatacagcaagctttc
gaaacacctggcgagcttaatactgacatggtttacgctcagcaaacacgacgcttttta
gaccgtgttgtaggctttatggtttctcctttgttgtgggcaaaagttgcacgtggtcta
tctgcaggacgagttcagtctgttgcggtacgcttattagttgagcgtgaacgtgaaatt
aaggcatttatccctgaagagttttgggatattcacgctgacgttaagaatactgagtct
gagttacgcttagaagtaaccaaacaagcaggaaaggcatttaagcctgtaaatgaagct
caggctagcgcagctgttaaaagccttgagagtgcagaatacaaagtaattagcgttgaa
gaaaaaccaagtaaaagtcgcccaagtgcgccattaattacttcaaccatgcaacaagcg
gcaagtacacgcctaggttatggcgttaagaaaactatgatgctcgctcagcgtttgtat
gaaggcggttatattacttatatgcgtaccgattctaccaatctttcaaaagatgcggtt
gaaatgtgtcgtgagtatgtaacgaacgagtttggtgctaaatatttaccaaaagatcca
attaactatagctctaaaggcaatgcacaagaagcgcatgaggcaattcgtccttcaagc
gttactgtgttgtctggtcatatcgaaggcgtagatgccgatgctaaaaagctgtatgag
ctaatttggcgtcagtttgtagcgtgtcaaatggtacctgctgaatacgacttaacaaca
ctgactgttgcagctaacgatttccagctcaaagcaaaaggccgcgtgcttcgctttgat
ggttggacaaaagtacaacctgcggtgcgtaaaaagaacgaagaagatcaatcactgcca
gctgttaaagaaggtgaaatacttactttaatagaacttgatcctaagcagcactttact
aagccgccagctcgctttagtgaagcaagtttagtaaaagagcttgaaaagcgtggtatt
ggtcgtccatctacttatgcgtcgattatatcaacaattcaagatcgtggttatgtacgt
gtagaaaatcgccgtttctttgctgaaaaaatgggtgaaattgtcactgatcgtttagtt
gaaaacttcactgatttaatgaactttgattttacagctaaaatggaaggtcgtttagat
gacattgctgaaggcgagcgtgtatggactcaagttttagataagttttatgctgatttt
tcaacgcaattaactgtcgctaaagacgagccagagaatggcggcatgcgtcttaatgag
atggttgaaaccgatatagaatgtcctacatgtagccgaaaaatgggtatacgtacggct
tcaaccggtgttttcttagggtgtactggttacagccttccgccaaaagagcgttgtaca
acaacaatgaacttagtgtcgggcgatgaagcggttgctgctgatgtcgaagacgtagaa
accgaaaaattaatgcagatgaagcgttgtcctatttgtgaaactgcaatggactcatac
ctaattgacgaaacccgtaaactacatgtgtgtggtaataacccagcatgtaaagggcat
atagttgaagaaggtacctttaaaattaaaggctacgacggaccaattatcgaatgtgat
aaatgcggttctgatatggagcttaaatcgggtcgctttggtaagtactttggctgtaac
aacgacgagtgtaagaacacacgtaagttacttaaaaatggcgaggctgctccaccaaaa
gaagatcccgttcacattactgaattagagtgtgagaagtcagatgcgtattttgtttta
cgtgatggcgctgcgggtatatttttagccgcaaatacttttcctaagtcacgtgaaaca
cgtgcacctaaggttgaagaactaaaacgctttagagaccgcatttcgcctaagttttat
tatttagcagatgcaccagctaaagatcctgatggtaatcttgctgttgtacgctatagc
cgtaaaaataaatctcagtatgttatgactgaagttgacggtaaagctaccggctggact
gctcattatgaagcaggtaaatggacagaagaagcgaagaaaaaagcagcgcctaaaaag
aaagcagctgcaaaaaaggcaccagctaaagctaagcctaaagcgaaagctaaaaaagaa
gatgaataa
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