Pseudoalteromonas distincta: FFU37_12700
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Entry
FFU37_12700 CDS
T08139
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pdv
Pseudoalteromonas distincta
Pathway
pdv03410
Base excision repair
pdv03430
Mismatch repair
pdv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FFU37_12700 (recJ)
03430 Mismatch repair
FFU37_12700 (recJ)
03440 Homologous recombination
FFU37_12700 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdv03400
]
FFU37_12700 (recJ)
DNA repair and recombination proteins [BR:
pdv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FFU37_12700 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FFU37_12700 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FFU37_12700 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Toprim_4
Caps_syn_GfcC_N
Motif
Other DBs
NCBI-ProteinID:
QCU75259
UniProt:
A0A4P9J3G5
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All DBs
Position
L1:complement(2844725..2846446)
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AA seq
573 aa
AA seq
DB search
MKKLIIARENVDDSHLPSNLHPVIKQIYANRNVFNADELNNSVATLHDFKLFKDIDKASD
LLIEALKAQSQILIVGDFDADGATSTATLMQGLEMFGFKHLDYLIPDRFSLGYGLSPALA
EQIVQIKPDLVITVDNGISCIAGIDILKAVGIKVLVTDHHLQGEQLPNADAIVNPNRHEC
NFPSKSIAGVGVAFYLLIALRSVMRDLGYFEQQPPPNLANLLDIVALGTVADVVALDANN
RTLVHQGLARIRSGKTRPGITALIEVANRNAARLSASDFGFSLAPRLNAAGRLDDMSLGI
ACLLSTDINQARSIAGELDSLNFARREIEQGMQAEAQAVLDRLAFSDDNVPDAICLFQDD
WHQGVIGILAGRLKEKYHRPTVIFAGGENGEIKGSCRSIEGLHMRDLLEGLNTAEPHLIN
KFGGHAMAAGLSINEQHFNDFKKAFDAAVSAQLSEESKRCIVFTDGELPNECFTMEFAQL
LKQSGPWGQQFPEPVFEHTFEVIQQRIVGEKHLKLVLKHQSGRLVDAIAFGIDVKEWPDT
EAKFVKVAYQLDINEFRGKFTLQLIVRELEKVH
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactaatcattgcgcgtgaaaacgttgacgactcgcatctaccgagtaattta
catcctgtaattaaacaaatttatgctaaccgcaatgtatttaatgccgacgagctaaat
aacagcgtagctacgcttcacgactttaaattgtttaaagatatcgacaaagccagcgat
ttattaattgaagcattaaaagcgcaaagccaaatattaatagtcggcgattttgatgcc
gatggcgcaacaagcactgcaacattaatgcaaggccttgagatgtttggttttaagcat
ttagattacttaattcctgaccggtttagcttaggttatggtttaagccccgcacttgca
gagcaaatagtacaaataaagcctgatttagtgatcaccgtagataacggcatatcgtgt
attgctggtattgatattttaaaagcggttggtataaaagtgctggtaacagatcaccac
ttacaaggtgagcagctgccaaatgccgatgcaatagtaaatccaaataggcacgaatgt
aacttcccgtctaaatctatagcaggtgttggcgttgctttttacttactgatagcactg
agaagcgtaatgcgagaccttggttattttgagcagcaaccgccgcctaatttagctaac
ttgctcgacattgtagcgcttggtacggttgctgacgtggtcgcacttgatgcaaataac
cgcaccttagtacaccaaggtttagcacgtattcgcagtggtaaaacacgccctggtatt
accgcgcttattgaagtggctaaccgcaatgctgcccgcttaagcgcaagcgactttggc
ttttcacttgcgccgcgtttaaatgcagcagggcgattagacgacatgagtttgggtata
gcttgcttgcttagcaccgacataaaccaagcgcgtagtatagccggcgagctcgatagc
ttaaactttgcacggcgcgaaatagaacaaggcatgcaagccgaggcgcaagccgtgctt
gatagactcgcatttagcgacgataacgtccctgatgcaatctgcttgtttcaagacgat
tggcaccaaggtgttattggtattttggctggtcgcttaaaagaaaaataccaccgacca
accgttatatttgctggtggcgaaaatggtgaaataaaaggttcgtgccgctctatagaa
gggttgcacatgcgcgacttactcgaagggcttaatactgctgagccacacttaattaat
aaatttggtggccacgcaatggccgctggtttaagtattaatgagcaacactttaacgac
tttaaaaaggcatttgatgctgcagtgagtgcgcaactgagtgaagaaagtaagcgctgt
attgtatttaccgacggtgagctgccaaacgagtgctttactatggaatttgcacagtta
ttaaagcaatcgggcccgtgggggcagcaatttcctgagccggtgtttgagcacacattt
gaagtaatacagcagcgcatagtcggcgaaaagcacttaaaacttgtattaaagcatcaa
tcagggcgattagttgacgccattgcctttggtattgatgtaaaagaatggcccgacaca
gaagcgaagtttgtaaaagtagcctatcaactagatataaatgagtttagaggtaaattt
acgctgcaattaatcgttagagagcttgaaaaagtgcactaa
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