Pseudoalteromonas distincta: FFU37_12830
Help
Entry
FFU37_12830 CDS
T08139
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pdv
Pseudoalteromonas distincta
Pathway
pdv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FFU37_12830 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdv03019
]
FFU37_12830 (recQ)
03400 DNA repair and recombination proteins [BR:
pdv03400
]
FFU37_12830 (recQ)
Enzymes [BR:
pdv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FFU37_12830 (recQ)
Messenger RNA biogenesis [BR:
pdv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FFU37_12830 (recQ)
DNA repair and recombination proteins [BR:
pdv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FFU37_12830 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
zf-CXXC
HEM4
Motif
Other DBs
NCBI-ProteinID:
QCU75283
UniProt:
A0A4P9J360
LinkDB
All DBs
Position
L1:2871238..2873061
Genome browser
AA seq
607 aa
AA seq
DB search
MNTSTPPSSTLVRKPETVLKQVFGYSEFRDGQKAVIDAAINGQDSLVLLPTGGGKSVCYQ
IPALVLEGVTIVISPLISLMQDQVTQLQALGVKAAYVNNSLAREEQQLVYQQLHQGQIKL
LYVAPEKVLQREFLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMM
ALTATADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKSQS
GIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGM
GINKPNVRFVLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDE
QRRRVEEQRFNAMASFAEAQTCRRQILLNYFSEYQREPCGNCDICLNPPKSFDGTLVAQQ
ALSCVYRAGQRFGLGYIVELLRGANTSRIRDNNHHELSTYGIGKDKSSEFWLSILRQLIH
QGLLSQDITQGASLRLTEAARVILKGEYALQLAEPRLQAKHVYQDKLAQFNYDKKLFARL
RALRKELADADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNKYGGEFLTAI
RHYLATN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatcaactccaccttctagcacccttgtgcgtaaacccgaaactgtcctcaaa
caagtgtttggctacagtgaatttcgcgacggtcaaaaagcagttattgatgccgctatt
aacggccaagactcgcttgtattgcttcctactggcggcggaaaatcggtgtgctaccaa
atccctgctttagtactcgaaggcgtaactattgttatatctccgcttatatcgctaatg
caagatcaggtaacgcaactgcaagctcttggggtaaaagccgcttacgttaataacagc
ttagcacgagaagagcagcaattggtgtatcaacagcttcatcaggggcaaattaagctc
ttatatgtggcgcctgaaaaagtattacaacgcgaatttttagagcgtttatcgcattta
aatgtgagtttatttgccattgacgaagcgcactgtgtgtcgcattggggccatgacttt
agacctcactactttcgcttaaacgaattaaagcaacgttttgcacatgtcccaatgatg
gcattaaccgccaccgccgataaagccacacggtttgatatagttgagcaattaaaacta
caacagccttatattcatactggcagctttgatcgccccaatattcgttacaccatagaa
gaaaaatttaaacctatggtgcaattgcttcgctacctaaaggagcaaaaaagccaaagc
ggtattatttattgcaccagccgtaaacgcgtagacgacattgctgaaaagcttgcagat
gcaggactaaacgctgccgcttatcatgctggtatgagtaacgagcaacgacaatttgta
caaaccgggtttgcccgtgacgatatacagatagtggtcgcaaccgttgcttttggcatg
ggcataaacaagcctaatgtgcgttttgtactgcattacgatattccaaaaagtatagag
tcgtactatcaagaaacaggtcgagctgggcgagatggacttgccgcagaagctataatg
tattttgacccagctgatataggtcgcgtaaggcgcttttttgaagacatagacgacgag
caacgccgccgcgtagaagaacaacgctttaacgcaatggcaagctttgccgaagcgcaa
acatgtcgtcgtcaaatattacttaactactttagtgaatatcaacgcgaaccttgtggc
aactgcgatatttgcttaaatccgccaaaaagctttgatggtacgttagtcgcccagcaa
gcactttcgtgtgtgtacagagcgggacaacgttttggacttggttatattgttgaatta
cttcgcggtgcaaacacgagccgcatccgcgataataatcatcatgagttaagtacctac
ggcataggtaaagataaaagcagtgagttttggctcagtattttacgccaacttattcat
caaggcttacttagccaagatataacacaaggtgcgtcacttagattaacagaagccgcg
cgtgtaattttaaaaggtgaatacgcactgcaattagccgagccacgcctgcaagccaaa
cacgtttatcaagataagttagcgcaatttaattacgacaaaaaactctttgctcgcctg
cgcgcacttcgtaaagaacttgctgatgccgacgatgtgccaccttatgtagtatttaat
gataaaacgttagccgaaatggcgcagcttatgccaacaaacgacagtgaatttttaaag
gtctcaggtgttggttttactaagttaaataagtacggcggcgaatttttaacggcaatt
cgacattacctagctactaattaa
DBGET
integrated database retrieval system
