Pseudoalteromonas distincta: FFU37_13520
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Entry
FFU37_13520 CDS
T08139
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pdv
Pseudoalteromonas distincta
Brite
KEGG Orthology (KO) [BR:
pdv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdv03021
]
FFU37_13520 (rpoH)
Transcription machinery [BR:
pdv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FFU37_13520 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
Sua5_C
Motif
Other DBs
NCBI-ProteinID:
QCU75415
UniProt:
F3BDX5
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All DBs
Position
L1:complement(3027596..3028459)
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AA seq
287 aa
AA seq
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MSKDLYAMALTVGQQSASMDGYLQAVSTIPMLKVEQEQELAKRLQEEGDLSAAKQLIMSH
LRFVAHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEFV
LKNWRIVKVATTKAQRKLFFNLRKNKKRLGWFNQAEVSTVASELGVSEKEVREMESRMSG
QDMGFDLTGDDNDDAPTSTYSPVQYLTDGAADLADDVEQEQWKEQAHTRLFSALKTLDER
SQDIVSARWLSDDKATLQELAQKYSVSAERVRQLEKTAMKKLQSAMS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagatttatacgcaatggcacttacagtcggacaacaaagcgcaagcatggac
ggttaccttcaagcggtaagcactattcctatgcttaaagttgaacaagagcaagaactt
gctaaaagacttcaggaagaaggcgatcttagtgctgccaagcaactcattatgtcgcat
ttacgctttgtagcacatattgctaaaagctactcgggatacggcttaccacaagctgac
cttattcaagaaggtaatataggcctgatgaaagcggttaaacgttttgaccctacagtg
ggtgtacgtttagtgtcgtttgcagtgcattggattaaagccgaaattcacgagtttgtt
cttaaaaactggcgcatagttaaagttgcaaccactaaagcgcaacgtaaattgtttttt
aatcttcgtaaaaacaaaaagcgtttaggctggttcaaccaagctgaggttagcactgtt
gctagcgagttaggtgtgagtgaaaaagaagtacgtgaaatggaatcgcgcatgagcggc
caagacatgggctttgacttaactggtgacgataacgacgatgcaccaacaagtacatac
tctccagtacagtatttaacagatggcgcagcagacttagctgacgacgttgaacaagag
cagtggaaagagcaagcgcatactcgtttatttagcgcacttaaaacactagatgagcgt
tcgcaagatattgttagcgcacgttggttgtctgatgataaagcgacgcttcaggagctt
gcacaaaagtacagtgtatctgctgagcgtgttcgtcagcttgaaaaaacagcgatgaaa
aagttacaaagcgctatgagctaa
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