Pseudoalteromonas distincta: FFU37_14190
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Entry
FFU37_14190 CDS
T08139
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdv
Pseudoalteromonas distincta
Pathway
pdv03420
Nucleotide excision repair
pdv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FFU37_14190 (uvrD)
03430 Mismatch repair
FFU37_14190 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdv03400
]
FFU37_14190 (uvrD)
Enzymes [BR:
pdv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FFU37_14190 (uvrD)
DNA repair and recombination proteins [BR:
pdv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FFU37_14190 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FFU37_14190 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
AAA_11
DUF3553
SAP18
DEAD
Motif
Other DBs
NCBI-ProteinID:
QCU75539
UniProt:
A0A4P9J462
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All DBs
Position
L1:3163763..3165928
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AA seq
721 aa
AA seq
DB search
MDVSQLLDGLNDKQRDAVAAPLQNMLVLAGAGSGKTRVLVHRIAWLMQVEQASAYSIFAV
TFTNKAAKEMRSRVEETLKAPVGGMWIGTFHGLSHRILRAHHREANLPEAFQILDSDDQL
RMIKRLLKSMNIDDKKWPAKQFGWYISAKKDEALRPKDIQAYDINEQMMLRVYAAYQEAC
DRAGLVDFAEILLRSYEVLKNNPTLLRHYQQRFAHMLVDEFQDTNTIQYAWLKLLAGDTN
SIMIVGDDDQSIYGWRGAKIENIKRFLTDFSAETIRLEQNYRSTATILKASNALIQNNSE
RMGKSLWTDGNDGEPISIYAAFNELDEARFVSSKLRSWLNAGNALQDAAILYRSNAQSRV
LEEAMLQEGLKYRIYGGMRFFERQEIKDALSYLRLVGNRQDDAAFERVINTPARGIGDKT
LSHIRDCARAESLPLWYAAKAIVEQQHLSGRASGAVSKFVELVEQIEDKISDLTLHEQAK
YTIQTSGLMAMYQAEKGEKGRARVENLEELISACDQYELPEDEEYSSPLQGFLAHTSLES
GEGQAEEHEDAVQMMTLHSAKGLEFPLVFMVGVEEGMFPSQQSNEESGRLEEERRLCYVG
MTRAMDKLYISHAESRRLYGQEKYHSPSRFLREIPEDCVEEIRIKTQISRPPAAGRFSAS
VSHAAFEDSGFNLGQRVLHAKFGVGTVLNYEGSGAQSRVQVNFDDLGSKWLVTAYARLQA
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcacaattactcgatggcttaaatgacaaacaacgcgatgccgttgcagcc
ccactacaaaacatgctggtattagcaggtgctgggtctggtaaaacacgagtgttagtt
catcgtattgcgtggcttatgcaagttgagcaagcatctgcttacagtatttttgccgta
acctttactaataaagcggctaaagaaatgcgtagccgcgttgaagaaacactaaaagcc
cctgtaggtggtatgtggattggtacgttccatggtttgtcgcatcgtattttacgtgct
catcaccgtgaagctaacttacctgaagcctttcaaattttagactctgacgatcaactt
cggatgatcaagcgcttattaaaatcgatgaatatcgatgataaaaaatggcctgctaaa
caatttggctggtacattagcgccaaaaaagatgaagcacttcgccctaaagatattcaa
gcatacgatattaacgagcaaatgatgctgcgtgtttacgccgcctatcaagaagcctgt
gatagagctggtttagttgattttgccgaaatattactacgcagctacgaagtgttaaaa
aataaccctacgttactacgtcattaccagcaacgctttgcacatatgctcgtagacgag
ttccaagatacaaataccattcaatatgcttggttaaagttacttgcaggcgatactaac
agcattatgattgtaggcgacgatgaccaaagcatttacggttggcgtggtgctaaaatc
gaaaacattaaacgctttttaactgactttagcgctgaaaccattcgccttgaacaaaac
taccgttcaaccgcgactattttgaaagcatctaatgcattaattcaaaataactcagag
cgtatgggtaaaagcttgtggaccgacggtaacgacggcgagccaatttctatttatgcg
gcatttaatgagttagacgaagcacgctttgtaagtagcaaactacgaagctggttaaat
gcaggtaatgccctacaagatgccgcaattttataccgtagtaacgcgcaatctcgtgta
ctcgaggaggctatgctgcaagaaggcttaaaataccgtatttatggtggtatgcgattc
ttcgaacgacaagaaattaaagatgcgttgtcgtacttacgcctagtaggtaatcgtcaa
gacgatgccgcgtttgagcgtgtaattaatacgccagcacgcggtattggcgataaaaca
ttgagccatatacgcgattgtgcacgagcagaatcgttaccgctttggtatgccgccaaa
gcaattgtagaacaacagcatttatctggtcgcgcttctggtgcagtaagtaagtttgta
gaactcgttgaacaaatagaagataaaattagcgacctaactttgcatgagcaagctaag
tacacaattcaaacctcaggcttgatggcaatgtaccaagccgaaaaaggtgaaaaaggt
cgtgctcgcgtagaaaacttagaagagctaattagtgcgtgtgatcagtatgagctgcct
gaagacgaagagtacagctcaccactacaaggctttttagcgcatacatcacttgagtca
ggtgaaggacaggcagaagaacacgaagacgccgtacaaatgatgacgcttcactcagct
aaaggcttagagtttccgctagtgtttatggtaggcgtagaggaaggcatgttcccttct
cagcaaagcaacgaagagtcgggtcgcttagaagaagagcgccgcctttgttatgtaggc
atgacacgagcaatggataagttatacattagccatgctgagagtcgccgcttatacggg
caagaaaaataccatagcccatctcgctttttacgcgaaatccctgaggactgcgttgaa
gaaattcgtattaaaacacagatttctcgtccacctgccgccgggcgttttagcgcatca
gttagccatgcagcatttgaagacagtggctttaacttagggcaacgagttttgcatgct
aagtttggtgttggtaccgtacttaattacgaaggcagtggcgcgcaatctcgcgtacaa
gttaactttgacgaccttggtagcaaatggttagtaacggcttatgcacgattacaagcg
gtataa
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