Pseudoalteromonas distincta: FFU37_17050
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Entry
FFU37_17050 CDS
T08139
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pdv
Pseudoalteromonas distincta
Brite
KEGG Orthology (KO) [BR:
pdv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdv03016
]
FFU37_17050 (rnd)
Enzymes [BR:
pdv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FFU37_17050 (rnd)
Transfer RNA biogenesis [BR:
pdv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FFU37_17050 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Sp-DndD
IL28A
Motif
Other DBs
NCBI-ProteinID:
QCU76179
UniProt:
A0A4P9J5V6
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All DBs
Position
S1:61732..62862
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AA seq
376 aa
AA seq
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MQYQLIETQNQLNTFVEQIKNKPILAIDTEFMRRRTLYPEVALIQVFDGEHLALIDPLAE
LSLFDFWEILKDPSVLKVLHSPSEDIEVFQKYAGFVPSPLFDTQFALQLLGEGNCMGFAL
MVKELQGIEIDKSESRTNWLQRPLTKKQLDYAAADTFYLLPCFELIIERINAAGFFDIVI
NESELIAKKRAFQTPDELLYKDIKNAWQLKPHELAVLKELAVWRRNKAIKKNLALNFVLK
EHNMTEIAKRGPSSLNALRQIPGVEAIEVNRSGVDIIKCIEVAKAIPDAEHPDVLKRLID
FPTYKKVAKDIKQKITKVAKEHNIPEDVMASKKQINQLISWNWKLTNEQKQSHIKPDLLS
SWRYTYVKDALKEWDN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgcaataccaattgatcgaaacccaaaatcaactgaacacttttgttgaacaaataaaa
aataagcctattttagctattgatactgagtttatgcgtcgtcgcactttgtatccagaa
gttgcacttatccaagtttttgatggtgagcatttagcgcttatcgatccgttagctgag
ctctcattattcgatttttgggaaatactaaaagatcctagtgttttaaaagtactgcat
tctccttcagaagatattgaggtttttcaaaaatacgcaggctttgttccatccccactt
tttgatacacaatttgcgttgcagttacttggggaaggtaactgtatgggctttgccctt
atggtaaaagagttgcaaggtattgaaatagataaaagtgagtcacgtactaactggctg
caacgtccgttaactaaaaaacagttagattatgctgctgcagatactttttacttattg
ccgtgtttcgagctgattatagagcgtattaatgccgctgggttctttgacattgtaata
aacgagagtgagctgatagctaaaaaacgtgcatttcaaacaccagacgagcttttatat
aaagatattaagaatgcatggcaactcaaaccgcacgaactcgcggttttaaaagaactt
gctgtatggcgcagaaacaaagccattaagaaaaatttagcgctaaattttgtgttaaaa
gaacataacatgactgaaattgccaaacgtggtccttcaagtttaaatgctctacgtcaa
attccaggagttgaagctattgaagttaatcgctctggtgtagatataatcaagtgtatt
gaagttgccaaagcaataccagatgctgagcaccctgatgtacttaagcgcttaattgat
tttcctacctataaaaaagtagccaaagatattaaacaaaagatcactaaagtcgctaaa
gagcacaatataccagaagacgttatggcctctaaaaagcaaattaatcaattgattagt
tggaattggaagttaactaatgagcaaaaacaaagccatattaagcctgatttattaagc
tcttggcgctatacctacgttaaagacgctttaaaagagtgggataactaa
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