Pseudoalteromonas distincta: FFU37_17535
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Entry
FFU37_17535 CDS
T08139
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pdv
Pseudoalteromonas distincta
Brite
KEGG Orthology (KO) [BR:
pdv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdv03400
]
FFU37_17535 (sbcD)
DNA repair and recombination proteins [BR:
pdv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FFU37_17535 (sbcD)
Archaeal homologous recombinant proteins
FFU37_17535 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
QCU76273
UniProt:
A0A4P9J5M0
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All DBs
Position
S1:178699..179946
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AA seq
415 aa
AA seq
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MKVLHTSDWHLGQQFYEHDRRVEHQAFFTWLLATLVEQQIDLLLVAGDIYHTATPSASAE
NQLYQFIKDAKKACPLLHVVIIAGNHDSANRILAAQPLLAQFDTHVVGRFDVATPDETVI
TINTNGKRAVIVAMPFLRASDVSLLSQTESGPSYAQGVAKAYELALEQATNINEQNSPLI
VMGHLHAKGGDISSDSERNLVIGGEESISANVFGKQANYVALGHLHKAQQVAKSDIIRYS
GTPIPMSFSERNYTHQVNVVEFIIDEKQHISTTVNPLYIPRSADVIILPKGECVPLSELC
EQIKALDTAQNIIAPYLRVKLKSSDTDTTFREQIEQALEGKHIKFCGIERVREQSAQNDD
NTVFEDLSEVEMLNPLNLLEQAFANDKDMAGQSVPDELKALLSDVINELTEQEQL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcctccacacctcagattggcaccttggccaacaattttacgaacacgatcgc
cgtgttgaacatcaagccttttttacatggttattagccactcttgttgaacaacaaata
gacttacttctagttgctggcgatatttatcatacagcgactccaagtgctagcgccgaa
aatcagctttatcaatttattaaagacgccaaaaaagcatgcccattattacatgtagtg
attattgcgggtaaccacgactctgcaaatcgtattttggcagctcagccattacttgca
cagtttgatactcacgtagtagggcgctttgatgtcgcaacacccgatgaaactgttatt
accataaataccaatggtaaacgcgctgtaatcgtcgctatgccatttttacgtgcaagc
gatgtaagtttacttagccaaaccgaaagcggccctagttatgctcaaggcgttgcaaaa
gcttacgagcttgcactagaacaagctactaatataaacgagcaaaactcaccattaata
gttatgggacatttacacgcaaaaggcggggatatctcaagtgattctgagcgtaactta
gtgataggtggtgaggagtctatttcagccaatgtatttggtaaacaagccaactatgtt
gcccttgggcatttacacaaagcgcaacaagtcgctaaaagcgatattattcgctacagc
ggcacacctatccctatgtcgttttcagagcgtaactacacgcaccaagtaaatgttgtt
gagtttattattgatgaaaaacaacatattagtacaactgtaaaccccctttacattcca
cgctctgccgatgtgattattttaccaaaaggggagtgtgtaccattaagcgaactatgc
gagcaaattaaagcgctcgacaccgcacaaaatataatagcgccttatttacgtgtaaag
cttaaatcaagcgataccgacaccaccttcagagaacaaatagaacaagcacttgaaggc
aagcatattaaattttgtggtattgaacgtgtacgtgagcaatcagcgcaaaatgacgac
aacaccgtatttgaagatttaagcgaagttgaaatgctcaacccactaaacctattagaa
caagcattcgcaaacgataaagacatggcagggcaaagcgtacccgatgagctaaaagca
cttttaagtgatgtgataaacgagcttacggagcaagaacaactatga
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