Pseudoalteromonas distincta: FFU37_19400
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Entry
FFU37_19400 CDS
T08139
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pdv
Pseudoalteromonas distincta
Pathway
pdv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FFU37_19400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdv03000
]
FFU37_19400
03400 DNA repair and recombination proteins [BR:
pdv03400
]
FFU37_19400
Enzymes [BR:
pdv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
FFU37_19400
Transcription factors [BR:
pdv03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FFU37_19400
DNA repair and recombination proteins [BR:
pdv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FFU37_19400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
DUF6233
ArsA_ATPase
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QCU76620
UniProt:
A0A4P9J6C9
LinkDB
All DBs
Position
S1:599635..600987
Genome browser
AA seq
450 aa
AA seq
DB search
MDTSHWQKARQSRDPRFDGLFYVAVKSTGIYCRPICPAPTAHEKNVAYYQFAHNAAQDGF
RPCIRCRPDSAPGSAAWQGTKTTALRAKQLIDQNDEHDCEKLAARLGISSRYLRQLFKQY
FGMSITQYRLFNQCHFAKKLIQETHLPLTEIAFAAGFKSIRRFNDAFLQQLNIAPSKLRS
GDKKPTSTLILTLPFRPPYNWPALQGFLQRRLIKPMEWITQTSYGRTFASDKYKGSFTAE
FIANKNHFSVSINIDNTAYLQPVINNIRRVLDLDADINLIETHLSANINNTFTVCEGLRL
PGIWSSFEAGIRAVLGQQVSVTAAHNLVTKLVDELGEKEGDAVYFPTAKIVTNSDFAFFK
MPQARKNALHNLAHFCALNPENDDLDEWLSLKGIGPWTVNYAKLRGQSQPDILLDGDLGV
KKAQAAANPFEPANCAPFRSYLTFQLWQQL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcacattggcaaaaagcacgtcagagtcgcgatcctcgttttgacgggctt
ttttacgtagcggtaaaaagtaccggtatttattgcagaccaatttgccctgcaccaacg
gctcacgaaaaaaacgttgcttattatcagtttgcccataacgcggcgcaagatggtttt
aggccctgtattcgttgcaggcccgatagtgcccctggcagcgcagcatggcagggtaca
aaaacgactgcacttagagcaaaacagttaatagatcaaaatgatgaacacgactgcgaa
aaattagcagctcgtttaggtataagtagtcgttatttaaggcagttgtttaagcagtat
tttggcatgtcgattacgcaatatcgattatttaaccaatgccactttgctaaaaaactg
attcaagaaacacatttaccccttaccgaaatagcgtttgccgcaggctttaaaagcatt
aggcgttttaatgatgcatttttacagcagttaaatatagctccctcgaagctgcgcagt
ggcgataaaaaaccaacgtcaacactcattttaaccctgccatttaggccgccttataat
tggcctgctttgcagggctttttacaaaggcgcttgataaaaccaatggagtggataacg
caaacgagctacgggcgtacttttgcaagtgataaatataaaggaagctttaccgctgaa
tttatagctaataaaaaccactttagtgtatctatcaatatagacaatacggcgtactta
caacctgttataaataatatacgccgtgtgcttgatttagatgccgatattaatttaatt
gaaacgcatttaagcgccaatataaacaatacgtttacagtgtgcgaagggctcagactt
ccggggatttggtcaagttttgaagccggtataagagctgtacttgggcaacaagtgagt
gttactgcggcacataatttagtaacaaagttagttgatgaattaggcgaaaaagagggc
gatgccgtttattttcctacggctaaaattgttactaatagtgattttgcattttttaaa
atgccacaagcacgcaaaaatgcactgcataatttagcccatttttgtgcactaaatcct
gaaaatgacgatttagacgaatggcttagcttaaaaggaattggcccttggacagtaaat
tatgcaaagctgcgaggacaaagccaacccgatatattacttgatggcgacttaggtgtt
aaaaaagctcaagcggcggcaaacccttttgagcctgctaattgcgctccttttcgctct
tacttaacgtttcaactttggcagcaattataa
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