Pseudomonas donghuensis: BV82_0028
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Entry
BV82_0028 CDS
T07361
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw00362
Benzoate degradation
pdw01100
Metabolic pathways
pdw01120
Microbial metabolism in diverse environments
pdw01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BV82_0028 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
BV82_0028 (pcaH)
Enzymes [BR:
pdw01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
BV82_0028 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
KDO01895
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Position
896582..897301
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AA seq
239 aa
AA seq
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MSAQDNSRFAIRDRNWHPKAFTPDYKTSVARSPRQALVSIPQSISESTGPDFSHLKFGPH
DHDLLLNFNNGGLPIGERIVLAGRVCDQYGKPIAHTLVEIWQANAGGRYRHKNDRYLAPL
DPNFGGVGRALTDREGYYSFRTIKPGPYPWRNGPNDWRPAHIHVSISGPSIATRLITQLY
FEGDPLIPMCPIVKSIANPDAVQSLIARLDMSNANPMDCLAYRFDIVLRGQRKTHFENC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcaagacaacagtcgcttcgctatccgtgaccgtaactggcacccgaaagcc
ttcaccccggactacaagacgtccgtcgcccgttcgccgcgccaggccctggtgagcatc
ccgcagtcgatcagcgaaagcaccggcccggatttctcgcacctgaagttcggcccgcac
gaccatgacctgctgctcaacttcaacaacggcggcctgccgatcggtgagcgcatcgtc
ctcgccggccgcgtctgcgaccagtacggcaagccgattgcgcataccctggtggagatc
tggcaagccaacgccggtggccgctaccggcacaagaacgaccgctacctggcgccgctg
gaccccaacttcggtggcgtcggccgtgccctgaccgaccgcgaaggctactacagcttc
cgcaccatcaagccgggcccgtacccctggcgcaatggccccaacgactggcgcccggcg
catatccatgtgtcgatcagcggcccgtcgattgccacgcgcttgattacccagctgtat
ttcgaaggcgacccgttgattccgatgtgcccgatcgtcaagtcgattgccaaccctgac
gcggtgcagagcctgatcgcacgcctggacatgagcaatgccaaccccatggattgcctg
gcctatcgcttcgacatcgtgttgcgcgggcagcgcaagacccacttcgaaaactgctga
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